Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-651P-201ENST00000411040 105 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 MRPS10P1-201ENST00000448483 130 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-295P-201ENST00000516901 104 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 RNU2-31P-201ENST00000516954 155 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 AC011921.3-201ENST00000605540 361 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 WWP1P1-201ENST00000466609 2769 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 SNORA38-201ENST00000363946 132 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.274-201ENST00000364714 101 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.331-201ENST00000365267 102 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AL390729.2-201ENST00000416137 156 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 TOMM22P2-201ENST00000430735 237 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 MTCO1P5-201ENST00000433573 344 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AL137159.1-201ENST00000452808 512 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 RNA5SP402-201ENST00000517148 110 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 BX284668.6-201ENST00000606899 438 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.68□□□□□ -1.98
NR2E3Q9Y5X4 AC009487.4-201ENST00000624969 3585 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-21P-201ENST00000384710 107 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 SRIP3-201ENST00000413200 219 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 AC093259.1-201ENST00000509755 300 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-107P-201ENST00000516643 102 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 RPL21P9-201ENST00000556149 474 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 AL109918.3-201ENST00000603072 338 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 MIR3674-201ENST00000636576 68 ntBASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NR2E3Q9Y5X4 UBE2WP1-201ENST00000362030 340 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-740P-201ENST00000364734 105 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.515-201ENST00000384535 112 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 MIR499A-201ENST00000384903 122 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 MIR548B-201ENST00000385247 97 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 RNA5SP475-201ENST00000410568 110 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 AC005042.3-201ENST00000453230 174 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 RNU4-71P-201ENST00000516258 113 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 RNU2-12P-201ENST00000517216 168 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 AC103810.6-201ENST00000606708 136 ntBASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.66□□□□□ -1.98
NR2E3Q9Y5X4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.65□□□□□ -1.98
NR2E3Q9Y5X4 RNU1-17P-201ENST00000363022 152 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-975P-201ENST00000384296 105 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 RNU2-54P-201ENST00000410299 190 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 AC123900.1-201ENST00000420390 96 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 AC091959.1-201ENST00000495857 238 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 RNU2-34P-201ENST00000516534 121 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 MIR4282-201ENST00000583613 67 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 MIR219B-201ENST00000637023 88 ntBASIC2.65□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 SNORA72.2-201ENST00000365028 127 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 MIR518E-201ENST00000385252 88 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 SNORA53-201ENST00000391141 249 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 EDDM3CP-201ENST00000415977 425 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 RNU7-57P-201ENST00000459540 60 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-948P-201ENST00000516374 107 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 CYCSP26-201ENST00000534107 320 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 MIR3145-201ENST00000580727 82 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 AC006001.4-201ENST00000622243 395 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
NR2E3Q9Y5X4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 MIR1185-2-201ENST00000408687 86 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 POLR2KP2-201ENST00000438155 177 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 SNORA4.4-201ENST00000515921 135 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 SNORD116-28-201ENST00000516123 91 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms