Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR3684-201ENST00000579779 74 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC091178.2-201ENST00000584401 117 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 ZNF299P-201ENST00000406845 1804 ntBASIC0.63□□□□□ -2.31
CLN6Q9NWW5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CLN6Q9NWW5 CASC19-280ENST00000642102 1351 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 RNU6-222P-201ENST00000362438 107 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 RNU6-1264P-201ENST00000383891 107 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.62□□□□□ -2.31
CLN6Q9NWW5 AC004832.4-201ENST00000608952 331 ntBASIC0.62□□□□□ -2.31
CLN6Q9NWW5 SNORA27.1-201ENST00000362604 124 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNU6-451P-201ENST00000362921 107 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNY3P3-201ENST00000363816 102 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 SNORD116-11-201ENST00000383882 92 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNU6-281P-201ENST00000384212 103 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.490-201ENST00000384413 102 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNU6-332P-201ENST00000391193 108 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNU1-139P-201ENST00000391307 165 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.61□□□□□ -2.31
CLN6Q9NWW5 UQCRBP2-201ENST00000447827 297 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC233266.1-201ENST00000454518 96 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AL049830.1-201ENST00000468034 425 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC117454.1-201ENST00000491120 168 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 SNORA70.12-201ENST00000516084 153 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 RNA5SP458-201ENST00000516188 119 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.688-201ENST00000516565 95 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.61□□□□□ -2.31
CLN6Q9NWW5 MIR4781-201ENST00000585250 76 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 FAM106DP-201ENST00000586416 501 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC100812.1-201ENST00000607622 580 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC242852.1-201ENST00000612151 96 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AL391903.3-201ENST00000612158 163 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC244015.1-201ENST00000622301 99 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 AC073544.1-201ENST00000600110 1595 ntBASIC0.61□□□□□ -2.31
CLN6Q9NWW5 MIRLET7C-201ENST00000362160 84 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 MIR373-201ENST00000362273 69 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 RNU6-595P-201ENST00000363944 107 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.6□□□□□ -2.31
CLN6Q9NWW5 MIR891A-201ENST00000401237 79 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 Y_RNA.595-201ENST00000410403 105 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AC090617.3-201ENST00000573670 475 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AL359821.1-201ENST00000605519 182 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AC245008.1-201ENST00000608123 476 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
CLN6Q9NWW5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CLN6Q9NWW5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
CLN6Q9NWW5 RNU4-12P-201ENST00000365233 139 ntBASIC0.59□□□□□ -2.31
CLN6Q9NWW5 RNU6-596P-201ENST00000365395 98 ntBASIC0.59□□□□□ -2.31
CLN6Q9NWW5 RNU6-1001P-201ENST00000411265 100 ntBASIC0.59□□□□□ -2.31
CLN6Q9NWW5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.59□□□□□ -2.31
CLN6Q9NWW5 MTATP6P17-201ENST00000431030 672 ntBASIC0.59□□□□□ -2.31
CLN6Q9NWW5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.59□□□□□ -2.31
CLN6Q9NWW5 RNU6-273P-201ENST00000516937 96 ntBASIC0.59□□□□□ -2.31
CLN6Q9NWW5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.59□□□□□ -2.31
CLN6Q9NWW5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.59□□□□□ -2.31
CLN6Q9NWW5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CLN6Q9NWW5 Y_RNA.38-201ENST00000362617 102 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 Y_RNA.106-201ENST00000363189 100 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 MIR526A1-201ENST00000384897 85 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 MIR520G-201ENST00000385064 90 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AL137792.2-201ENST00000443484 235 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 HMGN1P7-201ENST00000491722 313 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC005840.1-201ENST00000498412 377 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 RNU6-1116P-201ENST00000517269 99 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC022868.1-201ENST00000517767 391 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 AC023934.1-201ENST00000574529 2389 ntBASIC0.58□□□□□ -2.32
CLN6Q9NWW5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 RNU6-163P-201ENST00000384396 106 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 CYCTP-201ENST00000504253 315 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.57□□□□□ -2.32
CLN6Q9NWW5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.57□□□□□ -2.32
CLN6Q9NWW5 RNU6-1096P-201ENST00000517089 102 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 RNU1-54P-201ENST00000517181 120 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 AL358944.1-201ENST00000528537 144 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 MIR3942-201ENST00000585264 109 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 AC120024.3-201ENST00000603167 156 ntBASIC0.57□□□□□ -2.32
CLN6Q9NWW5 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms