Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNORA2.2-201ENST00000365473 135 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 RNU6-424P-201ENST00000384367 105 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC104332.1-201ENST00000440471 797 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.66□□□□□ -2.3
TREX1Q9NSU2 RNU7-175P-201ENST00000515915 61 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.665-201ENST00000516177 98 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC134698.4-201ENST00000523451 826 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.66□□□□□ -2.3
TREX1Q9NSU2 MIR4273-201ENST00000582824 84 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 PIGPP4-201ENST00000584447 307 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC011712.1-201ENST00000588959 234 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC124303.1-201ENST00000605703 360 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AL138726.1-201ENST00000614873 333 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AL359880.1-201ENST00000621879 266 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC006435.5-201ENST00000624486 112 ntBASIC0.66□□□□□ -2.3
TREX1Q9NSU2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.66□□□□□ -2.3
TREX1Q9NSU2 AC005592.1-201ENST00000566527 1640 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 RNU6-483P-201ENST00000384088 108 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 MIR7-2-201ENST00000384970 110 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 MTATP6P13-201ENST00000438531 667 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AP000870.1-201ENST00000472927 406 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC107401.1-201ENST00000503426 685 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC022493.2-201ENST00000506122 481 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC097462.1-201ENST00000514125 324 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC093303.1-201ENST00000514549 295 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 RNU6-405P-201ENST00000516637 110 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AP002001.1-203ENST00000534002 267 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AL162413.1-201ENST00000603198 110 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 AC068137.4-201ENST00000638485 296 ntBASIC0.65□□□□□ -2.31
TREX1Q9NSU2 RNU6-407P-201ENST00000365280 104 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 MIR10B-201ENST00000385011 110 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TREX1Q9NSU2 MTCO3P19-201ENST00000415864 321 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 MTCO3P18-201ENST00000440206 761 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
TREX1Q9NSU2 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.64□□□□□ -2.31
TREX1Q9NSU2 RNU6-256P-201ENST00000516747 97 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 AC092954.2-201ENST00000609103 430 ntBASIC0.64□□□□□ -2.31
TREX1Q9NSU2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU1-133P-201ENST00000364867 167 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.405-201ENST00000383979 100 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.451-201ENST00000384200 100 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 SNORA20B-201ENST00000384220 132 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.524-201ENST00000384564 100 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU6-306P-201ENST00000384617 107 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.561-201ENST00000384694 100 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU6-376P-201ENST00000384731 106 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU6-780P-201ENST00000391030 104 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU2-66P-201ENST00000410650 161 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 LINC01399-202ENST00000458450 244 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.63□□□□□ -2.31
TREX1Q9NSU2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.63□□□□□ -2.31
TREX1Q9NSU2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RPS26P48-201ENST00000491713 339 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 OR9P1P-201ENST00000496431 281 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.683-201ENST00000516508 93 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 RNU7-28P-201ENST00000516759 62 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 MIR3672-201ENST00000584290 82 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 Z99129.1-201ENST00000612510 255 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
TREX1Q9NSU2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 SNORA1B-201ENST00000362535 133 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.530-201ENST00000384587 101 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.533-201ENST00000384596 114 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 MIR562-201ENST00000384894 95 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 RNU6-332P-201ENST00000391193 108 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 ZNF885P-201ENST00000420174 1098 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC018710.1-201ENST00000506509 158 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 RNU6-1291P-201ENST00000516591 104 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
TREX1Q9NSU2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
TREX1Q9NSU2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.212-201ENST00000364177 102 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNU4-12P-201ENST00000365233 139 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 MIR605-201ENST00000385078 83 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 USMG5P1-201ENST00000425964 177 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RPEP5-201ENST00000441137 268 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AC233266.1-201ENST00000454518 96 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNU7-90P-201ENST00000459216 62 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms