Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 Z69908.1-201ENST00000622603 247 ntBASIC0.5□□□□□ -2.33
SDHAF3Q9NRP4 RNU6-1252P-201ENST00000363054 104 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 RNU6-280P-201ENST00000364145 104 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 Y_RNA.553-201ENST00000384670 102 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 RNU6-1068P-201ENST00000410958 103 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 HMGN2P26-201ENST00000463169 339 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 AP000870.1-201ENST00000472927 406 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 AC018710.1-201ENST00000506509 158 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 RNU7-28P-201ENST00000516759 62 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
SDHAF3Q9NRP4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 MIR517A-201ENST00000385001 87 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 ERLEC1P1-201ENST00000433806 578 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 DAP3P1-201ENST00000441522 278 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 Y_RNA.665-201ENST00000516177 98 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 AC022868.1-201ENST00000517767 391 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 AC068137.4-201ENST00000638485 296 ntBASIC0.48□□□□□ -2.33
SDHAF3Q9NRP4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC018865.2-201ENST00000423631 129 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 FABP5P4-201ENST00000437203 171 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 Z98949.2-201ENST00000440996 144 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC113410.1-201ENST00000505029 247 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 RNU6-107P-201ENST00000516643 102 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AP002004.2-201ENST00000531656 154 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AL158211.1-201ENST00000566763 763 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AC010999.1-201ENST00000611856 324 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AL138726.1-201ENST00000614873 333 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 AL008636.1-201ENST00000625038 1018 ntBASIC0.47□□□□□ -2.33
SDHAF3Q9NRP4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 RNU1-133P-201ENST00000364867 167 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 RNA5SP482-201ENST00000391269 118 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 DEFB108C-201ENST00000400154 252 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.615-201ENST00000410769 117 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 AC243428.1-201ENST00000421099 264 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 RPL21P9-201ENST00000556149 474 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 ZNF519P2-201ENST00000557032 169 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 AC006362.1-201ENST00000567392 174 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 AC023827.1-201ENST00000569247 97 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 MIR5696-201ENST00000578474 85 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 7SK.7-201ENST00000603504 247 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 MIR6863-201ENST00000636112 90 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 AC068137.3-201ENST00000639191 341 ntBASIC0.46□□□□□ -2.34
SDHAF3Q9NRP4 RNA5SP264-201ENST00000363115 107 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RNU4-41P-201ENST00000364426 143 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RNU6-407P-201ENST00000365280 104 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.373-201ENST00000365600 103 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.481-201ENST00000384373 102 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 SNORD99-201ENST00000408612 74 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RNU7-66P-201ENST00000459469 62 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AC010424.1-201ENST00000506336 297 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 ACA59.1-201ENST00000515966 143 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RNA5SP20-201ENST00000515976 84 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AC134698.4-201ENST00000523451 826 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AP003716.2-201ENST00000528260 108 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 MTND1P15-201ENST00000579262 949 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AC131055.1-201ENST00000584626 316 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 AC010525.2-201ENST00000590920 195 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 RMST_2.1-201ENST00000617263 136 ntBASIC0.45□□□□□ -2.34
SDHAF3Q9NRP4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 SNORA27.1-201ENST00000362604 124 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 RNU6-1085P-201ENST00000363576 107 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 RNU5F-3P-201ENST00000363767 117 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.336-201ENST00000365307 109 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 RNU6-376P-201ENST00000384731 106 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 MIR562-201ENST00000384894 95 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 AL162725.1-201ENST00000435405 301 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 MTATP6P13-201ENST00000438531 667 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 AC010620.1-201ENST00000601088 1102 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 AC012557.2-201ENST00000605919 418 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.44□□□□□ -2.34
SDHAF3Q9NRP4 MTND5P26-201ENST00000426018 1752 ntBASIC0.43□□□□□ -2.34
SDHAF3Q9NRP4 RNU6-222P-201ENST00000362438 107 ntBASIC0.43□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.135-201ENST00000363439 95 ntBASIC0.43□□□□□ -2.34
SDHAF3Q9NRP4 RNU6-833P-201ENST00000363486 107 ntBASIC0.43□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.43□□□□□ -2.34
SDHAF3Q9NRP4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms