Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.332-201ENST00000365271 113 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 MIR95-201ENST00000385072 81 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 AL603914.1-201ENST00000401964 204 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.14□□□□□ -1.91
SSU72Q9NP77 AL357134.1-201ENST00000445848 426 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 RNU7-149P-201ENST00000516739 59 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 U6.73-201ENST00000619194 103 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 AC009093.8-201ENST00000641769 292 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 AL136360.1-201ENST00000503377 1900 ntBASIC3.14□□□□□ -1.91
SSU72Q9NP77 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSU72Q9NP77 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSU72Q9NP77 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SSU72Q9NP77 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSU72Q9NP77 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
SSU72Q9NP77 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SSU72Q9NP77 Y_RNA.111-201ENST00000363248 100 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 RNU6-1138P-201ENST00000365359 106 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 SNORA22-201ENST00000383907 134 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 RNU6-546P-201ENST00000383991 107 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 AC060773.1-201ENST00000421698 310 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 AC063976.4-201ENST00000421971 163 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
SSU72Q9NP77 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 RPL21P129-201ENST00000491732 478 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 AC007751.1-201ENST00000529260 376 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 MIR3613-201ENST00000579844 87 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 MIR2681-201ENST00000581814 105 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 U6.95-201ENST00000636931 70 ntBASIC3.13□□□□□ -1.91
SSU72Q9NP77 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SSU72Q9NP77 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.13□□□□□ -1.91
SSU72Q9NP77 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSU72Q9NP77 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
SSU72Q9NP77 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SSU72Q9NP77 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSU72Q9NP77 SNORD58C-201ENST00000365223 64 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 CD24P4-201ENST00000382840 243 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSU72Q9NP77 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 NDUFA4P2-201ENST00000489989 244 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 RNU6-781P-201ENST00000516377 101 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 Y_RNA.690-201ENST00000516603 95 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 RNU6-856P-201ENST00000516959 98 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 AC007224.1-201ENST00000564410 144 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 AC105245.1-201ENST00000581934 244 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 Pinc.1-201ENST00000616452 154 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.12□□□□□ -1.91
SSU72Q9NP77 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
SSU72Q9NP77 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSU72Q9NP77 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSU72Q9NP77 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 Y_RNA.52-201ENST00000362760 96 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 RNU6-743P-201ENST00000364151 106 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 RNU1-96P-201ENST00000364163 162 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 MIRLET7F2-201ENST00000385277 83 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 AC123900.1-201ENST00000420390 96 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 RPS26P45-201ENST00000471748 340 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 RN7SL633P-201ENST00000488974 297 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 RNU7-128P-201ENST00000517247 62 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 AC093908.1-201ENST00000623125 8092 ntBASIC3.11□□□□□ -1.91
SSU72Q9NP77 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
SSU72Q9NP77 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SSU72Q9NP77 MIR891A-201ENST00000401237 79 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 Y_RNA.651-201ENST00000459380 103 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 OR9P1P-201ENST00000496431 281 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RNU5E-3P-201ENST00000515913 68 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RNU6-1061P-201ENST00000516530 99 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 AC133485.4-201ENST00000561835 220 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 AC138907.4-201ENST00000570107 226 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 MIR7157-201ENST00000635801 60 ntBASIC3.1□□□□□ -1.91
SSU72Q9NP77 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.1□□□□□ -1.91
SSU72Q9NP77 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SSU72Q9NP77 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
SSU72Q9NP77 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSU72Q9NP77 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSU72Q9NP77 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 RNU6-147P-201ENST00000383983 107 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 MIR624-201ENST00000385217 97 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.09□□□□□ -1.91
SSU72Q9NP77 AL161788.1-201ENST00000441805 169 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 RNU6-991P-201ENST00000516168 107 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 RNU6-1096P-201ENST00000517089 102 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 IGKV1-22-201ENST00000524313 326 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 AC091178.2-201ENST00000584401 117 ntBASIC3.09□□□□□ -1.91
SSU72Q9NP77 AL365205.2-201ENST00000594586 68 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms