Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-430P-201ENST00000517078 107 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 MIR4436A-201ENST00000585278 85 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 AP001836.1-201ENST00000604675 523 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 AC091304.9-201ENST00000612091 226 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 AC008873.1-201ENST00000625051 138 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 MIR377-201ENST00000362145 69 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 MT-TN-201ENST00000387400 73 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 SUMO1P2-201ENST00000452524 304 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 AC023442.1-201ENST00000531247 422 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 FRG2DP-202ENST00000566967 323 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 AC010525.2-201ENST00000590920 195 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 AP000811.1-201ENST00000603803 651 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 AC072039.2-201ENST00000608883 439 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 AC006504.8-201ENST00000621046 635 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 SNORD38B-202ENST00000625943 69 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 MIR4320-201ENST00000636981 65 ntBASIC-0.97□□□□□ -2.56
SCAPERQ9BY12 SNORA25.7-201ENST00000364375 127 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-769P-201ENST00000384407 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 MTCO1P20-201ENST00000425366 358 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 SNORA18.7-201ENST00000516910 131 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU2-60P-201ENST00000517290 128 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AL355375.2-201ENST00000574825 175 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 MIR544B-201ENST00000582372 78 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AC008608.1-201ENST00000603910 127 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AC097460.3-201ENST00000623099 442 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 SNORD114-11-201ENST00000363738 75 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-10P-201ENST00000384036 107 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 MIR15B-201ENST00000385045 98 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-447P-201ENST00000410293 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-355P-201ENST00000410427 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-791P-201ENST00000410467 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-705P-201ENST00000410601 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-860P-201ENST00000410860 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-785P-201ENST00000411324 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 snoU13.6-201ENST00000458785 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AC091951.3-201ENST00000504093 246 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AC120024.3-201ENST00000603167 156 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 U6.90-201ENST00000614007 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 U6.70-201ENST00000620287 104 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 AC138649.3-201ENST00000622154 254 ntBASIC-0.98□□□□□ -2.57
SCAPERQ9BY12 RNU6-468P-201ENST00000384003 109 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AC243428.1-201ENST00000421099 264 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 MTND1P26-201ENST00000440488 538 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 USP9YP25-201ENST00000457708 443 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 RNA5SP454-201ENST00000517231 127 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 RPL21P9-201ENST00000556149 474 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 MIR4432-201ENST00000581823 84 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AC091178.2-201ENST00000584401 117 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AC008521.1-201ENST00000587471 187 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 AL139022.2-201ENST00000606934 443 ntBASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.99□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.203-201ENST00000364106 102 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.311-201ENST00000365068 96 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.410-201ENST00000383992 113 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 MIR516B2-201ENST00000385190 85 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC010493.1-201ENST00000513479 292 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC091965.4-201ENST00000607691 587 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC108747.1-201ENST00000609508 535 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 AC245297.2-201ENST00000610119 565 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1□□□□□ -2.57
SCAPERQ9BY12 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 SNORD45.3-201ENST00000363836 72 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 RNU6-621P-201ENST00000364752 109 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 RNU6-364P-201ENST00000384387 107 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 MIR802-201ENST00000390235 94 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 PIGPP3-201ENST00000425307 415 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 RNU7-102P-201ENST00000458948 62 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 AC116562.3-201ENST00000506136 177 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 AC022616.3-201ENST00000523940 148 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 MIR6738-201ENST00000619620 64 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 AC112487.2-201ENST00000637950 304 ntBASIC-1.01□□□□□ -2.57
SCAPERQ9BY12 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 AL117339.3-201ENST00000418733 162 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 MTCO1P5-201ENST00000433573 344 ntBASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.02□□□□□ -2.57
SCAPERQ9BY12 MRPS10P1-201ENST00000448483 130 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms