Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 USP9YP12-201ENST00000450481 570 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 MTND2P31-201ENST00000512602 616 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 AC105417.1-201ENST00000514691 285 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 MIR2115-201ENST00000516657 100 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 AL049777.1-201ENST00000622740 518 ntBASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.23□□□□□ -2.45
LIMD2Q9BT23 SNORD87-201ENST00000364849 89 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 RNA5SP128-201ENST00000365305 116 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 RNU6-929P-201ENST00000384429 107 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MIR136-201ENST00000385207 82 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 SNORA75.6-201ENST00000391318 127 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MIR548H2-201ENST00000408874 88 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MTND4P18-201ENST00000447010 465 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 RPL23AP75-201ENST00000491601 451 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 RPL39P5-202ENST00000512505 151 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MTND4P33-201ENST00000556706 766 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 MIR3684-201ENST00000579779 74 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 AL355073.2-201ENST00000612106 557 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 AC027807.2-201ENST00000616099 408 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 AL138960.2-201ENST00000625145 535 ntBASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
LIMD2Q9BT23 RNU6-500P-201ENST00000362349 107 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 U8.5-201ENST00000364528 136 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 SNORA8.2-201ENST00000384372 139 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MIR450B-201ENST00000401182 78 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 RNU2-29P-201ENST00000410423 189 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 RNU2-59P-201ENST00000410482 191 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MTND3P9-201ENST00000429526 346 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 RNU7-56P-201ENST00000458744 62 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 U8.21-201ENST00000459536 136 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 AC114811.1-201ENST00000507207 168 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MTND1P35-201ENST00000526739 508 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 AL137161.1-201ENST00000532231 390 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 SCOCP1-201ENST00000554676 349 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MIR4762-201ENST00000585261 75 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 AC010608.3-201ENST00000625048 527 ntBASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.25□□□□□ -2.45
LIMD2Q9BT23 MIR377-201ENST00000362145 69 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 U8.7-201ENST00000364940 136 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 MIR7-2-201ENST00000384970 110 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RPS29P15-201ENST00000458329 171 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AC107401.1-201ENST00000503426 685 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AC091951.3-201ENST00000504093 246 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNU6-848P-201ENST00000515948 107 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNU6-617P-201ENST00000516147 107 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNU6-473P-201ENST00000516164 107 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNU6-977P-201ENST00000516411 103 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 RNA5SP268-201ENST00000516828 124 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AC093027.1-201ENST00000546698 429 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AL158211.1-201ENST00000566763 763 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AL355375.2-201ENST00000574825 175 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 MIR4804-201ENST00000581683 73 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 SNORA25.18-201ENST00000607153 114 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 AC006566.1-201ENST00000608943 513 ntBASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
LIMD2Q9BT23 SNORA9.1-201ENST00000362412 131 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 RNU6-606P-201ENST00000384721 111 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MIR487A-201ENST00000385009 80 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MIR610-201ENST00000385139 96 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MT-TN-201ENST00000387400 73 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 AC243428.1-201ENST00000421099 264 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 AC023442.1-201ENST00000531247 422 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MTND1P8-201ENST00000571424 950 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 CPDP1-201ENST00000579660 283 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MIR548AO-201ENST00000579992 96 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MIR4645-201ENST00000583158 77 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 U2.17-201ENST00000611454 95 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 AL357075.2-201ENST00000614906 189 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MIR6779-201ENST00000617283 64 ntBASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.27□□□□□ -2.45
LIMD2Q9BT23 MTND4P12-201ENST00000498999 1377 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 SNORD114-28-201ENST00000363610 72 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 RNU6-934P-201ENST00000365154 107 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 SNORA20B-201ENST00000384220 132 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR1-2-201ENST00000384961 85 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR145-201ENST00000384967 88 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 SNORD73A-201ENST00000386062 65 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 AC104692.1-201ENST00000472406 90 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms