Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SH2D3AQ9BRG2 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
SH2D3AQ9BRG2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AC068700.1-201ENST00000565862 3754 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 RNU6-486P-201ENST00000363116 107 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 Y_RNA.170-201ENST00000363746 110 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 SNORA18.2-201ENST00000383865 132 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 TOMM22P2-201ENST00000430735 237 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AL135790.2-201ENST00000437701 267 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 RNU2-44P-201ENST00000516795 194 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 MIR3133-201ENST00000583157 78 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SH2D3AQ9BRG2 U3.8-201ENST00000363675 217 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 SNORA64-201ENST00000384674 134 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 Y_RNA.662-201ENST00000516028 97 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 RNU6-107P-201ENST00000516643 102 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC136628.3-201ENST00000521868 290 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC108706.1-201ENST00000611053 297 ntBASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SH2D3AQ9BRG2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SH2D3AQ9BRG2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.46□□□□□ -2.01
SH2D3AQ9BRG2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 SNORD114-7-201ENST00000362520 77 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 RNU6-801P-201ENST00000364087 105 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 SNORD50.2-201ENST00000365465 70 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MIR29B2-201ENST00000385055 81 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC024067.1-201ENST00000426199 223 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 RPL30P4-201ENST00000429309 333 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MICF-203ENST00000432679 129 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC140059.1-201ENST00000489238 361 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MIR449C-201ENST00000516047 92 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 RNU6-1219P-201ENST00000516143 112 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MIR5006-201ENST00000583027 110 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC006380.1-201ENST00000603598 186 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AL670379.2-201ENST00000604983 252 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC021753.1-201ENST00000635724 168 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 MIR7515-201ENST00000637837 67 ntBASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SH2D3AQ9BRG2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 YWHAEP4-201ENST00000505390 198 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 RNU7-200P-201ENST00000516105 62 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 AL713866.2-201ENST00000603579 219 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 AC104465.1-201ENST00000611365 139 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 AC090517.3-201ENST00000625170 141 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 U6.115-201ENST00000636045 103 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 Z82209.1-201ENST00000422141 2135 ntBASIC2.45□□□□□ -2.02
SH2D3AQ9BRG2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 Y_RNA.8-201ENST00000362353 102 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 SNORA68.1-201ENST00000364537 132 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 RNU6-1274P-201ENST00000384557 107 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 SNORA19-201ENST00000384737 128 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MIR548B-201ENST00000385247 97 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 Y_RNA.580-201ENST00000391004 95 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AL031003.1-201ENST00000404229 172 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AL357139.1-201ENST00000407792 426 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AL121890.1-201ENST00000435457 205 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 RNU6-346P-201ENST00000516288 111 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MTND5P41-201ENST00000517498 206 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MIR3144-201ENST00000579460 79 ntBASIC2.44□□□□□ -2.02
SH2D3AQ9BRG2 MIR4648-201ENST00000580107 72 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms