Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-222P-201ENST00000362438 107 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.179-201ENST00000363844 90 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-280P-201ENST00000364145 104 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-281P-201ENST00000384212 103 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 SNORD65B-201ENST00000459126 73 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 snoU13.18-201ENST00000459483 104 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MTND5P5-201ENST00000503764 376 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU7-175P-201ENST00000515915 61 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU4-49P-201ENST00000516080 140 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MIR5701-3-201ENST00000578890 82 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MIR4273-201ENST00000582824 84 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MIR5701-1-201ENST00000585138 82 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 MIR5701-2-201ENST00000615634 82 ntBASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
RHOXF2Q9BQY4 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1186P-201ENST00000410429 97 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC009161.1-201ENST00000417306 376 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-329P-201ENST00000459618 107 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC011352.1-201ENST00000512300 793 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC026782.1-201ENST00000512952 449 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 RNU7-99P-201ENST00000516271 62 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-165P-201ENST00000517170 99 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC004584.2-201ENST00000570407 410 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 MIR5695-201ENST00000579717 85 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC125232.2-201ENST00000592457 143 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 AC010999.1-201ENST00000611856 324 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 MIR6128-201ENST00000615528 109 ntBASIC0.84□□□□□ -2.27
RHOXF2Q9BQY4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-874P-201ENST00000362390 105 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.453-201ENST00000384223 109 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.473-201ENST00000384333 102 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1215P-201ENST00000384441 102 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.573-201ENST00000384763 105 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 MIR489-201ENST00000384923 84 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-440P-201ENST00000390882 105 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC245047.3-201ENST00000429428 127 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 MTND4LP16-201ENST00000440828 295 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC092989.1-201ENST00000481235 277 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1114P-201ENST00000516022 107 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AL137100.2-201ENST00000555786 315 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 MIR4790-201ENST00000577799 79 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC018638.8-201ENST00000588755 281 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC018462.2-201ENST00000605375 395 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 AC005014.2-201ENST00000607795 599 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.83□□□□□ -2.28
RHOXF2Q9BQY4 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.796-201ENST00000364268 102 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.799-201ENST00000364992 102 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1013P-201ENST00000384180 107 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-950P-201ENST00000384651 107 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 MIR329-1-201ENST00000385028 80 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 MRPL42P3-201ENST00000401492 326 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AL355796.1-201ENST00000406706 323 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1001P-201ENST00000411265 100 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 ELOCP21-201ENST00000412558 336 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 EIF1P2-201ENST00000428233 350 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 MRPS10P1-201ENST00000448483 130 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.682-201ENST00000516457 100 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 RNU1-54P-201ENST00000517181 120 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AC090142.3-201ENST00000519012 385 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AC093023.1-201ENST00000547375 507 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AL357075.2-201ENST00000614906 189 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 MIR6767-201ENST00000637302 66 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
RHOXF2Q9BQY4 MTND5P16-201ENST00000460269 1703 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 RNU5F-3P-201ENST00000363767 117 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.184-201ENST00000363884 108 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms