Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SCOCP1-201ENST00000554676 349 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 UBL5P4-201ENST00000562584 236 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 AC068790.2-201ENST00000602601 557 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 AC017083.3-201ENST00000609955 700 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 MIR8076-201ENST00000611401 83 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU5F-7P-201ENST00000363696 115 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 Y_RNA.185-201ENST00000363894 100 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 Y_RNA.560-201ENST00000384689 102 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 RNU6-376P-201ENST00000384731 106 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 MIR520F-201ENST00000384824 87 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AL049545.1-201ENST00000401856 572 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 MIR1302-7-201ENST00000408841 72 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AL035398.1-201ENST00000430869 322 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 MTND4P32-201ENST00000437189 1237 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 snoU13.6-201ENST00000458785 104 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 RNU6-1291P-201ENST00000516591 104 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 RNU6-341P-201ENST00000516973 96 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 RNU6-58P-201ENST00000517143 103 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.03□□□□□ -2.4
ALPK3Q96L96 MTND4P7-201ENST00000523876 130 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AC011458.1-201ENST00000604034 617 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AC007684.1-201ENST00000609671 477 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AL136317.1-201ENST00000612653 226 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 AC009248.2-201ENST00000619826 254 ntBASIC0.03□□□□□ -2.4
ALPK3Q96L96 RNU6-727P-201ENST00000363592 107 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 RNU6-923P-201ENST00000364753 107 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 SNORD87-201ENST00000364849 89 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 MIR573-201ENST00000384964 99 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.03□□□□□ -2.41
ALPK3Q96L96 CALM2P4-201ENST00000430810 426 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.03□□□□□ -2.41
ALPK3Q96L96 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.03□□□□□ -2.41
ALPK3Q96L96 ZNF114P1-201ENST00000453500 292 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 RNU6-612P-201ENST00000516909 102 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 MTND1P5-201ENST00000517906 940 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.03□□□□□ -2.41
ALPK3Q96L96 HIF1AP1-201ENST00000553642 175 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 AC023827.1-201ENST00000569247 97 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 MIR4778-201ENST00000577635 80 ntBASIC0.03□□□□□ -2.41
ALPK3Q96L96 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.03□□□□□ -2.41
ALPK3Q96L96 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
ALPK3Q96L96 MIR18A-201ENST00000362310 71 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU6-369P-201ENST00000362515 102 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 Y_RNA.100-201ENST00000363141 102 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU6-1214P-201ENST00000363650 109 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU6-137P-201ENST00000363680 108 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 MIR122-201ENST00000385044 85 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 MIR520G-201ENST00000385064 90 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 MIR520H-201ENST00000385126 88 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 CALM2P3-201ENST00000400429 449 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 MIR1827-201ENST00000408549 66 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU2-9P-201ENST00000410194 145 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU6-177P-201ENST00000411257 104 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.02□□□□□ -2.41
ALPK3Q96L96 RPS3AP17-201ENST00000472594 777 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.02□□□□□ -2.41
ALPK3Q96L96 AC107401.1-201ENST00000503426 685 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU7-41P-201ENST00000515917 61 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 RNU7-43P-201ENST00000516554 64 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 MRPS36P3-201ENST00000519284 130 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.02□□□□□ -2.41
ALPK3Q96L96 AP002004.2-201ENST00000531656 154 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 AP001506.1-201ENST00000615444 211 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 AL158209.2-201ENST00000619266 216 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 AC092634.7-201ENST00000621022 103 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 SCARNA4-201ENST00000629045 128 ntBASIC0.02□□□□□ -2.41
ALPK3Q96L96 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RNU6-280P-201ENST00000364145 104 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 SNORA40.3-201ENST00000390964 122 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AC008134.1-201ENST00000420943 193 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AC073261.1-201ENST00000429409 121 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 DAP3P1-201ENST00000441522 278 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 HSFY5P-201ENST00000453726 309 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RNU7-167P-201ENST00000459160 62 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AP002963.1-201ENST00000530590 184 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 CPDP1-201ENST00000579660 283 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AC131055.1-201ENST00000584626 316 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AC091304.9-201ENST00000612091 226 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AF246928.1-201ENST00000623768 87 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 MIR101-1-201ENST00000362265 75 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 Y_RNA.267-201ENST00000364679 109 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.01□□□□□ -2.41
ALPK3Q96L96 MIR136-201ENST00000385207 82 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RNU6-325P-201ENST00000411132 105 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RNU6-1304P-201ENST00000411374 106 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AL663109.1-201ENST00000411498 844 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 SNRPGP12-201ENST00000449481 213 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 MTND1P22-201ENST00000510572 951 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RNU6-189P-201ENST00000516120 101 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RN7SKP164-201ENST00000516138 266 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 SNORA18.6-201ENST00000516792 115 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AL137161.1-201ENST00000532231 390 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 RPL21P9-201ENST00000556149 474 ntBASIC0.01□□□□□ -2.41
ALPK3Q96L96 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms