Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC019193.3-201ENST00000609144 554 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AC010999.1-201ENST00000611856 324 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 MIRLET7C-201ENST00000362160 84 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.355-201ENST00000365462 98 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 SNORD116-11-201ENST00000383882 92 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 RNU6-281P-201ENST00000384212 103 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 RNU1-139P-201ENST00000391307 165 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 AL451046.2-201ENST00000403074 277 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 AL355796.1-201ENST00000406706 323 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 MTATP6P13-201ENST00000438531 667 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.704-201ENST00000516851 102 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 DEFB108E-201ENST00000524692 240 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 AL357312.1-201ENST00000603879 298 ntBASIC0.74□□□□□ -2.29
ECHDC3Q96DC8 RNU6-595P-201ENST00000363944 107 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.414-201ENST00000384011 101 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 SNORA20B-201ENST00000384220 132 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 MTCO2P7-201ENST00000446518 666 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 RNU7-175P-201ENST00000515915 61 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 RNU7-172P-201ENST00000517125 64 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 SNORA4-201ENST00000584302 138 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AC004832.4-201ENST00000608952 331 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 AC022079.1-201ENST00000621546 602 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 MIR1321-201ENST00000637766 79 ntBASIC0.73□□□□□ -2.29
ECHDC3Q96DC8 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.38-201ENST00000362617 102 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.490-201ENST00000384413 102 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 MIR562-201ENST00000384894 95 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 RNU7-21P-201ENST00000459430 62 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.683-201ENST00000516508 93 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 AC090142.3-201ENST00000519012 385 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
ECHDC3Q96DC8 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 SNORA1B-201ENST00000362535 133 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.51-201ENST00000362725 102 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.796-201ENST00000364268 102 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.265-201ENST00000364677 108 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.799-201ENST00000364992 102 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.405-201ENST00000383979 100 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.451-201ENST00000384200 100 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 SNORD116-1-201ENST00000384335 95 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.524-201ENST00000384564 100 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.533-201ENST00000384596 114 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.561-201ENST00000384694 100 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 RNU6-332P-201ENST00000391193 108 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 RNU5A-5P-201ENST00000411054 116 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 MTND3P23-201ENST00000431980 347 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 MTND1P29-201ENST00000448112 647 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC093850.1-201ENST00000454121 251 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 snoU13.25-201ENST00000458945 104 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC091021.1-201ENST00000468051 388 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 RNU6-1114P-201ENST00000516022 107 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 RNU6-947P-201ENST00000516264 106 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC027419.1-201ENST00000522976 328 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AP002001.1-203ENST00000534002 267 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 MIR3684-201ENST00000579779 74 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AL117336.2-201ENST00000602435 335 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 AC005592.1-201ENST00000566527 1640 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
ECHDC3Q96DC8 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 RNU2-16P-201ENST00000410712 136 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 ELOCP21-201ENST00000412558 336 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 AP002004.2-201ENST00000531656 154 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 7SK.7-201ENST00000603504 247 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.7□□□□□ -2.3
ECHDC3Q96DC8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 SNORA27.1-201ENST00000362604 124 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 MTND1P1-201ENST00000445453 368 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 AC026407.1-201ENST00000518369 204 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 RPL21P9-201ENST00000556149 474 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 MIR3942-201ENST00000585264 109 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 AL096861.1-201ENST00000610899 123 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 AL391903.3-201ENST00000612158 163 ntBASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 RMST_2.1-201ENST00000617263 136 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms