Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAM1L1Q8N609 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRAM1L1Q8N609 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 RNU6-95P-201ENST00000384697 107 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC093019.1-201ENST00000443135 252 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 ACA59.1-201ENST00000515966 143 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AL358944.1-201ENST00000528537 144 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC010999.1-201ENST00000611856 324 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 AC068137.3-201ENST00000639191 341 ntBASIC0.52□□□□□ -2.33
TRAM1L1Q8N609 RNU6-833P-201ENST00000363486 107 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.796-201ENST00000364268 102 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.799-201ENST00000364992 102 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 RNU4-12P-201ENST00000365233 139 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 SNORA20B-201ENST00000384220 132 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 MIR526A1-201ENST00000384897 85 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 RPL30P16-201ENST00000419341 429 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 MTND1P11-201ENST00000456661 876 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 ELL2P3-201ENST00000457883 1602 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 AC107401.1-201ENST00000503426 685 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.673-201ENST00000516306 88 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.683-201ENST00000516508 93 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 MIR5696-201ENST00000578474 85 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 7SK.7-201ENST00000603504 247 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 AC099654.12-201ENST00000639868 649 ntBASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.267-201ENST00000364679 109 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.336-201ENST00000365307 109 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.355-201ENST00000365462 98 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 MIR517A-201ENST00000385001 87 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 RNU5A-5P-201ENST00000411054 116 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 AC243428.1-201ENST00000421099 264 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 U7.7-201ENST00000459276 60 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 AP000870.1-201ENST00000472927 406 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 RNU6-405P-201ENST00000516637 110 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
TRAM1L1Q8N609 SNORA27.1-201ENST00000362604 124 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 RNA5SP264-201ENST00000363115 107 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1085P-201ENST00000363576 107 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.269-201ENST00000364685 89 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.508-201ENST00000384502 114 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.553-201ENST00000384670 102 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 RNU6-376P-201ENST00000384731 106 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 MIR891A-201ENST00000401237 79 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 MTCYBP4-201ENST00000401524 249 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 AC018865.2-201ENST00000423631 129 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1278P-201ENST00000516130 107 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 AP003716.2-201ENST00000528260 108 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 MIR3192-201ENST00000584920 77 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 AL138726.1-201ENST00000614873 333 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 AC027279.3-201ENST00000625055 122 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.49□□□□□ -2.33
TRAM1L1Q8N609 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.135-201ENST00000363439 95 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1264P-201ENST00000383891 107 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.409-201ENST00000383990 98 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 MIR520G-201ENST00000385064 90 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNU1-139P-201ENST00000391307 165 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 snoU13.18-201ENST00000459483 104 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 HMGN2P26-201ENST00000463169 339 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 CYCTP-201ENST00000504253 315 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 AC018710.1-201ENST00000506509 158 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 AC046134.1-201ENST00000514454 666 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNA5SP20-201ENST00000515976 84 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1114P-201ENST00000516022 107 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 Y_RNA.665-201ENST00000516177 98 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 AC009229.3-201ENST00000608056 282 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 SEPT14P17-201ENST00000617978 177 ntBASIC0.48□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1335P-201ENST00000365426 107 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 SEPT14P3-201ENST00000439401 183 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 MTCO1P19-201ENST00000443487 500 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AL732372.2-207ENST00000445840 183 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 SEPT14P2-201ENST00000453405 183 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC233266.1-201ENST00000454518 96 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 SEPT14P4-201ENST00000513445 186 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 RNU7-175P-201ENST00000515915 61 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 RNU6-1291P-201ENST00000516591 104 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 RNU6-107P-201ENST00000516643 102 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 FO082796.1-201ENST00000523795 183 ntBASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.47□□□□□ -2.33
TRAM1L1Q8N609 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms