Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 MIR489-201ENST00000384923 84 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 MIR518E-201ENST00000385252 88 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 MIR876-201ENST00000401147 81 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 RPS29P13-201ENST00000402041 169 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 RNU2-62P-201ENST00000410868 191 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 AL158050.1-201ENST00000416077 457 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 RNU7-185P-201ENST00000459215 60 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 MTND3P25-201ENST00000509243 135 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 AC021146.6-201ENST00000514659 117 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 MIR4802-201ENST00000581881 80 ntBASIC-1.57□□□□□ -2.66
LINC00643Q86TS7 SNORD28-201ENST00000384706 75 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 MIR18B-201ENST00000454574 71 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 RNA5SP169-201ENST00000517268 117 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 SNORA70.25-201ENST00000612741 95 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 AC012409.4-201ENST00000612923 249 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 AL139418.1-201ENST00000613613 177 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 AC093726.3-201ENST00000637588 150 ntBASIC-1.58□□□□□ -2.66
LINC00643Q86TS7 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 RNU6-125P-201ENST00000384505 107 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 MTCO3P40-201ENST00000392516 676 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 MIR320C1-201ENST00000408566 88 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 TIMM9P2-201ENST00000419324 266 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AC117522.1-201ENST00000509821 380 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AC097462.1-201ENST00000514125 324 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 SNORA26.10-201ENST00000516427 141 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AL445435.1-201ENST00000604232 665 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AC006441.5-201ENST00000612680 209 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 AC010608.3-201ENST00000625048 527 ntBASIC-1.59□□□□□ -2.66
LINC00643Q86TS7 RNU6-607P-201ENST00000411283 108 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 AL390729.2-201ENST00000416137 156 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 MCFD2P1-201ENST00000417812 300 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 RNU7-172P-201ENST00000517125 64 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 AP003168.1-201ENST00000530091 307 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 MIR3681-201ENST00000580089 72 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 MIR4639-201ENST00000584938 69 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 Pinc.1-201ENST00000616452 154 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 AL359757.2-201ENST00000624309 274 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 AC010332.2-201ENST00000613083 1904 ntBASIC-1.6□□□□□ -2.67
LINC00643Q86TS7 RNU4-73P-201ENST00000363164 141 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 MTCO1P27-201ENST00000448269 226 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 RNU7-182P-201ENST00000459009 62 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 AC087683.1-201ENST00000591187 441 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 AC073539.2-201ENST00000597113 165 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 AC069545.1-201ENST00000605671 358 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.61□□□□□ -2.67
LINC00643Q86TS7 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 MTCO3P19-201ENST00000415864 321 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 MTND4LP16-201ENST00000440828 295 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 RNU7-73P-201ENST00000458743 63 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 RNU2-10P-201ENST00000516375 211 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 RNU6-881P-201ENST00000516813 102 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 MIR5589-201ENST00000579442 60 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 MIR548AR-201ENST00000582191 57 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 AC087685.1-201ENST00000587507 141 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 AP001836.1-201ENST00000604675 523 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 uc_338.4-201ENST00000616635 176 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 AC022306.3-201ENST00000619930 550 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 AC084368.1-201ENST00000620935 65 ntBASIC-1.62□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 SNORD68-201ENST00000363214 84 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 SNORA63C-201ENST00000364578 129 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 SNORD28B-201ENST00000390993 75 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AL358944.1-201ENST00000528537 144 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 MIR5708-201ENST00000579723 85 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AL121992.2-201ENST00000606262 256 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AC105081.1-201ENST00000617727 106 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AC244669.1-204ENST00000621564 178 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AC006435.5-201ENST00000624486 112 ntBASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.63□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 RNU4-36P-201ENST00000364294 144 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 U8.6-201ENST00000364939 135 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 AL590623.1-201ENST00000427864 105 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 CALM2P2-201ENST00000428512 440 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 MTND1P32-201ENST00000433043 938 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 AC010486.3-201ENST00000511602 785 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 AC010493.1-201ENST00000513479 292 ntBASIC-1.64□□□□□ -2.67
LINC00643Q86TS7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms