Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 RNU6-241P-201ENST00000391148 104 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 AL049545.1-201ENST00000401856 572 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.46□□□□□ -2.48
GTF2A1P52655 MTND4P18-201ENST00000447010 465 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 AC005042.3-201ENST00000453230 174 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 SCARNA18-201ENST00000459004 134 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 AL355375.2-201ENST00000574825 175 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 MIR4703-201ENST00000577728 79 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 AC090897.1-201ENST00000580909 226 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 MIR3941-201ENST00000582572 103 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 RNU4-5P-201ENST00000607255 135 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 SEPT14P19-203ENST00000633205 211 ntBASIC-0.46□□□□□ -2.48
GTF2A1P52655 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU6-396P-201ENST00000365369 105 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU6-376P-201ENST00000384731 106 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.47□□□□□ -2.48
GTF2A1P52655 SUMO1P2-201ENST00000452524 304 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.47□□□□□ -2.48
GTF2A1P52655 RPS29P15-201ENST00000458329 171 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU7-167P-201ENST00000459160 62 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 AC104692.1-201ENST00000472406 90 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNU6-63P-201ENST00000516690 95 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 RNA5SP54-201ENST00000516951 92 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 AL049777.1-201ENST00000622740 518 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 AC067863.3-201ENST00000624172 122 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.47□□□□□ -2.48
GTF2A1P52655 AC013437.2-201ENST00000639587 677 ntBASIC-0.47□□□□□ -2.48
GTF2A1P52655 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
GTF2A1P52655 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 SNORD115-8-201ENST00000363856 82 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 U8.5-201ENST00000364528 136 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 SNORD115-38-201ENST00000365037 82 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.48□□□□□ -2.49
GTF2A1P52655 SNORA2A-201ENST00000383885 135 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 RNU6-925P-201ENST00000384629 104 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 MT-TN-201ENST00000387400 73 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
GTF2A1P52655 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.48□□□□□ -2.49
GTF2A1P52655 MTND1P26-201ENST00000440488 538 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 AL359672.1-201ENST00000442302 409 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.48□□□□□ -2.49
GTF2A1P52655 AC069271.1-201ENST00000445577 156 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 USP9YP25-201ENST00000457708 443 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 SNORD4A-201ENST00000459174 72 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.48□□□□□ -2.49
GTF2A1P52655 AC091885.1-201ENST00000506658 268 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 MTND1P35-201ENST00000526739 508 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 MTND1P8-201ENST00000571424 950 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 AC005176.2-201ENST00000596933 147 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 MIR2909-201ENST00000617113 69 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 AC010608.3-201ENST00000625048 527 ntBASIC-0.48□□□□□ -2.49
GTF2A1P52655 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
GTF2A1P52655 SNORD68-201ENST00000363214 84 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 RNU6-727P-201ENST00000363592 107 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 SNORA20B-201ENST00000384220 132 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.49□□□□□ -2.49
GTF2A1P52655 RPL17P19-201ENST00000489069 552 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.49□□□□□ -2.49
GTF2A1P52655 AC105417.1-201ENST00000514691 285 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 AC008608.1-201ENST00000603910 127 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 uc_338.11-201ENST00000619132 160 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 MTND4P12-201ENST00000498999 1377 ntBASIC-0.49□□□□□ -2.49
GTF2A1P52655 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AC018865.2-201ENST00000423631 129 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AL365184.2-201ENST00000431139 435 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 RNU7-138P-201ENST00000459479 64 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 RPL23AP75-201ENST00000491601 451 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 RNU4-49P-201ENST00000516080 140 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 RNU7-129P-201ENST00000516128 62 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 MTND4P33-201ENST00000556706 766 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AC133485.4-201ENST00000561835 220 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 MIR4762-201ENST00000585261 75 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AF250324.2-201ENST00000608299 610 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AL133173.2-201ENST00000614270 90 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.5□□□□□ -2.49
GTF2A1P52655 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.5□□□□□ -2.49
GTF2A1P52655 RNU6-501P-201ENST00000364072 100 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 MIR938-201ENST00000401216 83 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 RNU2-72P-201ENST00000411175 163 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 MTCO2P11-201ENST00000431069 680 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 GPR143P-201ENST00000434155 205 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AL353572.1-201ENST00000442490 417 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC079354.2-201ENST00000453523 154 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 RNU7-159P-201ENST00000459284 62 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 U8.21-201ENST00000459536 136 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC091179.3-201ENST00000474761 144 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 TRBVB-201ENST00000477100 408 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.51□□□□□ -2.49
GTF2A1P52655 SNORA25.14-201ENST00000516481 132 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 Vault.3-201ENST00000516676 95 ntBASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.51□□□□□ -2.49
GTF2A1P52655 AC010525.2-201ENST00000590920 195 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms