Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6-107P-201ENST00000516643 102 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 RNU7-30P-201ENST00000516835 62 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 MTND4LP26-201ENST00000518144 282 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.94□□□□□ -2.26
CX3CR1P49238 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
CX3CR1P49238 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
CX3CR1P49238 MIR4438-201ENST00000585271 93 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 AC080078.2-201ENST00000603766 501 ntBASIC0.94□□□□□ -2.26
CX3CR1P49238 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
CX3CR1P49238 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CX3CR1P49238 AL391987.6-201ENST00000305671 199 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 RNU6-454P-201ENST00000364292 107 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 Y_RNA.364-201ENST00000365532 101 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 SNORA20B-201ENST00000384220 132 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 RNU6-601P-201ENST00000384540 107 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CX3CR1P49238 RNU6-482P-201ENST00000391068 107 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 Y_RNA.599-201ENST00000410489 109 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 AC074085.1-201ENST00000413598 418 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 USMG5P1-201ENST00000425964 177 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 MRPS10P1-201ENST00000448483 130 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 AC010469.2-201ENST00000496412 480 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 AP000942.3-201ENST00000603702 160 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 AL359757.2-201ENST00000624309 274 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CX3CR1P49238 CASC19-280ENST00000642102 1351 ntBASIC0.93□□□□□ -2.26
CX3CR1P49238 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 Y_RNA.279-201ENST00000364763 95 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 RNU6-1304P-201ENST00000411374 106 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.92□□□□□ -2.26
CX3CR1P49238 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.92□□□□□ -2.26
CX3CR1P49238 RNU7-87P-201ENST00000459343 62 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
CX3CR1P49238 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.92□□□□□ -2.26
CX3CR1P49238 Y_RNA.708-201ENST00000516950 96 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.92□□□□□ -2.26
CX3CR1P49238 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.92□□□□□ -2.26
CX3CR1P49238 AL137100.2-201ENST00000555786 315 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC004584.2-201ENST00000570407 410 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC090617.3-201ENST00000573670 475 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 AC011712.1-201ENST00000588959 234 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 7SK.7-201ENST00000603504 247 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 MIR1244-1-201ENST00000612829 85 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 MIR1244-3-201ENST00000635744 85 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 MIR1244-2-201ENST00000636449 85 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 MIR1244-4-202ENST00000636813 85 ntBASIC0.92□□□□□ -2.26
CX3CR1P49238 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 Y_RNA.358-201ENST00000365491 99 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 Y_RNA.482-201ENST00000384377 111 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 MIR222-201ENST00000384992 110 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CX3CR1P49238 MRPL42P3-201ENST00000401492 326 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 Y_RNA.619-201ENST00000410951 90 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
CX3CR1P49238 RPS27P22-201ENST00000478056 241 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
CX3CR1P49238 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.91□□□□□ -2.26
CX3CR1P49238 AC097462.1-201ENST00000514125 324 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 SNORA70.22-201ENST00000517160 124 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AL121579.1-201ENST00000555129 305 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AC055872.1-201ENST00000570978 278 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AL021879.1-201ENST00000611756 288 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AC098679.4-201ENST00000624241 654 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 AC018630.2-201ENST00000534866 2403 ntBASIC0.91□□□□□ -2.26
CX3CR1P49238 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CX3CR1P49238 RNU6-845P-201ENST00000362578 103 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 Y_RNA.72-201ENST00000362894 103 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 Y_RNA.248-201ENST00000364501 109 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 RNU6-593P-201ENST00000364716 112 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 RNU6-505P-201ENST00000384427 107 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 SNORA75.4-201ENST00000391278 119 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.9□□□□□ -2.27
CX3CR1P49238 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.9□□□□□ -2.27
CX3CR1P49238 UQCRBP2-201ENST00000447827 297 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC107399.1-201ENST00000451226 265 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC087343.1-201ENST00000477341 475 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC010598.1-201ENST00000510378 103 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC018448.1-201ENST00000552843 316 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC091178.2-201ENST00000584401 117 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AC104984.5-201ENST00000586878 94 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.9□□□□□ -2.27
CX3CR1P49238 AC106754.2-201ENST00000623006 233 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 U6.115-201ENST00000636045 103 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 AL669831.3-213ENST00000636676 183 ntBASIC0.9□□□□□ -2.27
CX3CR1P49238 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CX3CR1P49238 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CX3CR1P49238 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 Y_RNA.160-201ENST00000363677 92 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 RNU6-879P-201ENST00000364328 108 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 RNU6-99P-201ENST00000364721 107 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 SNORD81.2-201ENST00000365153 76 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.89□□□□□ -2.27
CX3CR1P49238 RNU6-767P-201ENST00000384132 107 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 Y_RNA.505-201ENST00000384489 102 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms