Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC091812.1-201ENST00000432235 1948 ntBASIC1.72□□□□□ -2.13
CDH3P22223 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH3P22223 Y_RNA.11-201ENST00000362375 109 ntBASIC1.71□□□□□ -2.14
CDH3P22223 Y_RNA.28-201ENST00000362554 111 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP99-201ENST00000364020 114 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNU1-96P-201ENST00000364163 162 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNU6-417P-201ENST00000384712 107 ntBASIC1.71□□□□□ -2.14
CDH3P22223 MRPL35P1-201ENST00000404272 572 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
CDH3P22223 SDAD1P3-201ENST00000427380 333 ntBASIC1.71□□□□□ -2.14
CDH3P22223 SNORD65B-201ENST00000459126 73 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP57-201ENST00000459463 123 ntBASIC1.71□□□□□ -2.14
CDH3P22223 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH3P22223 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.71□□□□□ -2.14
CDH3P22223 RNU6-1153P-201ENST00000516760 105 ntBASIC1.71□□□□□ -2.14
CDH3P22223 Y_RNA.711-201ENST00000516993 102 ntBASIC1.71□□□□□ -2.14
CDH3P22223 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
CDH3P22223 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH3P22223 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH3P22223 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH3P22223 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
CDH3P22223 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
CDH3P22223 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.71□□□□□ -2.14
CDH3P22223 AC240442.1-201ENST00000616055 283 ntBASIC1.71□□□□□ -2.14
CDH3P22223 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
CDH3P22223 MIR3674-201ENST00000636576 68 ntBASIC1.71□□□□□ -2.14
CDH3P22223 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH3P22223 RNA5SP432-201ENST00000362480 116 ntBASIC1.7□□□□□ -2.14
CDH3P22223 Y_RNA.216-201ENST00000364205 93 ntBASIC1.7□□□□□ -2.14
CDH3P22223 RNU6-482P-201ENST00000391068 107 ntBASIC1.7□□□□□ -2.14
CDH3P22223 Y_RNA.645-201ENST00000391229 102 ntBASIC1.7□□□□□ -2.14
CDH3P22223 MIR1302-11-201ENST00000408051 138 ntBASIC1.7□□□□□ -2.14
CDH3P22223 MIR1302-9-201ENST00000408365 138 ntBASIC1.7□□□□□ -2.14
CDH3P22223 MIR1302-10-201ENST00000408734 138 ntBASIC1.7□□□□□ -2.14
CDH3P22223 CST2P1-201ENST00000425770 87 ntBASIC1.7□□□□□ -2.14
CDH3P22223 MTND1P14-201ENST00000427400 950 ntBASIC1.7□□□□□ -2.14
CDH3P22223 AC245047.4-201ENST00000433189 144 ntBASIC1.7□□□□□ -2.14
CDH3P22223 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH3P22223 MTCYBP6-201ENST00000441810 138 ntBASIC1.7□□□□□ -2.14
CDH3P22223 MIR1302-2-201ENST00000607096 138 ntBASIC1.7□□□□□ -2.14
CDH3P22223 AC005592.1-201ENST00000566527 1640 ntBASIC1.69□□□□□ -2.14
CDH3P22223 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
CDH3P22223 SNORA22B-201ENST00000383876 138 ntBASIC1.69□□□□□ -2.14
CDH3P22223 AL627390.1-201ENST00000396055 340 ntBASIC1.69□□□□□ -2.14
CDH3P22223 AL355796.1-201ENST00000406706 323 ntBASIC1.69□□□□□ -2.14
CDH3P22223 MIR1253-201ENST00000408273 105 ntBASIC1.69□□□□□ -2.14
CDH3P22223 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CDH3P22223 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
CDH3P22223 SNORA25.10-201ENST00000515926 124 ntBASIC1.69□□□□□ -2.14
CDH3P22223 RNU6-1146P-201ENST00000516282 102 ntBASIC1.69□□□□□ -2.14
CDH3P22223 AC023442.1-201ENST00000531247 422 ntBASIC1.69□□□□□ -2.14
CDH3P22223 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
CDH3P22223 MIR3171-201ENST00000584270 74 ntBASIC1.69□□□□□ -2.14
CDH3P22223 AC069114.2-201ENST00000604699 304 ntBASIC1.69□□□□□ -2.14
CDH3P22223 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDH3P22223 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDH3P22223 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CDH3P22223 AC245060.5-201ENST00000610778 3293 ntBASIC1.69□□□□□ -2.14
CDH3P22223 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-1266P-201ENST00000362794 105 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-20P-201ENST00000384106 107 ntBASIC1.68□□□□□ -2.14
CDH3P22223 Y_RNA.458-201ENST00000384240 102 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
CDH3P22223 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNA5SP467-201ENST00000391274 118 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNA5SP475-201ENST00000410568 110 ntBASIC1.68□□□□□ -2.14
CDH3P22223 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH3P22223 AL163540.1-201ENST00000485382 386 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
CDH3P22223 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
CDH3P22223 AC040926.1-201ENST00000530195 238 ntBASIC1.68□□□□□ -2.14
CDH3P22223 AC022432.1-201ENST00000595739 310 ntBASIC1.68□□□□□ -2.14
CDH3P22223 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
CDH3P22223 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH3P22223 AC004467.1-201ENST00000615678 330 ntBASIC1.68□□□□□ -2.14
CDH3P22223 AC010205.1-201ENST00000616668 449 ntBASIC1.68□□□□□ -2.14
CDH3P22223 U6.108-201ENST00000637764 58 ntBASIC1.68□□□□□ -2.14
CDH3P22223 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CDH3P22223 MIR126-201ENST00000362291 85 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RNU1-17P-201ENST00000363022 152 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RNU4-76P-201ENST00000364509 141 ntBASIC1.67□□□□□ -2.14
CDH3P22223 SNORA20B-201ENST00000384220 132 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
CDH3P22223 AC093852.1-201ENST00000503587 266 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RNU2-12P-201ENST00000517216 168 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RNU6-988P-201ENST00000519081 107 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AC084364.2-201ENST00000546924 395 ntBASIC1.67□□□□□ -2.14
CDH3P22223 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.67□□□□□ -2.14
CDH3P22223 AC044792.1-201ENST00000593294 196 ntBASIC1.67□□□□□ -2.14
CDH3P22223 RPS29P30-201ENST00000600975 111 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AC104695.3-201ENST00000604052 296 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AC005828.6-201ENST00000606610 232 ntBASIC1.67□□□□□ -2.14
CDH3P22223 AL021879.1-201ENST00000611756 288 ntBASIC1.67□□□□□ -2.14
CDH3P22223 U6.115-201ENST00000636045 103 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms