Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AL356379.1-201ENST00000414105 126 ntBASIC2.44□□□□□ -2.02
ATF3P18847 AL354751.2-201ENST00000415471 210 ntBASIC2.44□□□□□ -2.02
ATF3P18847 RNU6-988P-201ENST00000519081 107 ntBASIC2.44□□□□□ -2.02
ATF3P18847 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.44□□□□□ -2.02
ATF3P18847 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
ATF3P18847 AC002984.1-201ENST00000591692 448 ntBASIC2.44□□□□□ -2.02
ATF3P18847 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.44□□□□□ -2.02
ATF3P18847 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
ATF3P18847 AC240442.1-201ENST00000616055 283 ntBASIC2.44□□□□□ -2.02
ATF3P18847 Y_RNA.80-201ENST00000362996 102 ntBASIC2.43□□□□□ -2.02
ATF3P18847 Y_RNA.148-201ENST00000363557 117 ntBASIC2.43□□□□□ -2.02
ATF3P18847 RNU4-76P-201ENST00000364509 141 ntBASIC2.43□□□□□ -2.02
ATF3P18847 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.43□□□□□ -2.02
ATF3P18847 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.43□□□□□ -2.02
ATF3P18847 AC009474.2-201ENST00000451383 136 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
ATF3P18847 RNA5SP233-201ENST00000459153 113 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AC025033.1-201ENST00000463883 194 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AC079804.2-201ENST00000490376 200 ntBASIC2.43□□□□□ -2.02
ATF3P18847 Y_RNA.711-201ENST00000516993 102 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AP002001.1-203ENST00000534002 267 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.43□□□□□ -2.02
ATF3P18847 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.43□□□□□ -2.02
ATF3P18847 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AL773524.1-201ENST00000614065 229 ntBASIC2.43□□□□□ -2.02
ATF3P18847 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.43□□□□□ -2.02
ATF3P18847 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.43□□□□□ -2.02
ATF3P18847 AC010205.1-201ENST00000616668 449 ntBASIC2.43□□□□□ -2.02
ATF3P18847 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ATF3P18847 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.43□□□□□ -2.02
ATF3P18847 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATF3P18847 RNU6-961P-201ENST00000363893 105 ntBASIC2.42□□□□□ -2.02
ATF3P18847 Y_RNA.287-201ENST00000364853 94 ntBASIC2.42□□□□□ -2.02
ATF3P18847 Y_RNA.485-201ENST00000384395 102 ntBASIC2.42□□□□□ -2.02
ATF3P18847 RNU6-417P-201ENST00000384712 107 ntBASIC2.42□□□□□ -2.02
ATF3P18847 AC244636.1-201ENST00000421152 228 ntBASIC2.42□□□□□ -2.02
ATF3P18847 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
ATF3P18847 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.42□□□□□ -2.02
ATF3P18847 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.42□□□□□ -2.02
ATF3P18847 AL390123.1-201ENST00000603216 237 ntBASIC2.42□□□□□ -2.02
ATF3P18847 AL121655.1-201ENST00000605811 308 ntBASIC2.42□□□□□ -2.02
ATF3P18847 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATF3P18847 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
ATF3P18847 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ATF3P18847 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.41□□□□□ -2.02
ATF3P18847 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATF3P18847 RNU4-50P-201ENST00000364361 141 ntBASIC2.41□□□□□ -2.02
ATF3P18847 RNU6-1019P-201ENST00000364424 107 ntBASIC2.41□□□□□ -2.02
ATF3P18847 SNORD14.1-201ENST00000365609 90 ntBASIC2.41□□□□□ -2.02
ATF3P18847 Y_RNA.540-201ENST00000384638 111 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AC009310.1-201ENST00000414414 451 ntBASIC2.41□□□□□ -2.02
ATF3P18847 SUMO1P2-201ENST00000452524 304 ntBASIC2.41□□□□□ -2.02
ATF3P18847 RPS27P21-201ENST00000486977 252 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AC010598.1-201ENST00000510378 103 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AC024995.1-201ENST00000523014 93 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AC040926.1-201ENST00000530195 238 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AL137100.2-201ENST00000555786 315 ntBASIC2.41□□□□□ -2.02
ATF3P18847 MIR4299-201ENST00000577899 72 ntBASIC2.41□□□□□ -2.02
ATF3P18847 AC011476.5-201ENST00000615594 130 ntBASIC2.41□□□□□ -2.02
ATF3P18847 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ATF3P18847 AC091812.1-201ENST00000432235 1948 ntBASIC2.4□□□□□ -2.02
ATF3P18847 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ATF3P18847 RNU6-454P-201ENST00000364292 107 ntBASIC2.4□□□□□ -2.03
ATF3P18847 AC117470.1-201ENST00000381974 330 ntBASIC2.4□□□□□ -2.03
ATF3P18847 Y_RNA.424-201ENST00000384063 103 ntBASIC2.4□□□□□ -2.03
ATF3P18847 RNA5SP100-201ENST00000410903 110 ntBASIC2.4□□□□□ -2.03
ATF3P18847 RNA5SP59-201ENST00000410922 110 ntBASIC2.4□□□□□ -2.03
ATF3P18847 AC069257.2-201ENST00000441819 155 ntBASIC2.4□□□□□ -2.03
ATF3P18847 RPL23AP6-201ENST00000446637 472 ntBASIC2.4□□□□□ -2.03
ATF3P18847 RNA5SP57-201ENST00000459463 123 ntBASIC2.4□□□□□ -2.03
ATF3P18847 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.4□□□□□ -2.03
ATF3P18847 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ATF3P18847 Y_RNA.713-201ENST00000517013 96 ntBASIC2.4□□□□□ -2.03
ATF3P18847 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.4□□□□□ -2.03
ATF3P18847 AC020661.2-201ENST00000560114 134 ntBASIC2.4□□□□□ -2.03
ATF3P18847 MIR3171-201ENST00000584270 74 ntBASIC2.4□□□□□ -2.03
ATF3P18847 AC005176.2-201ENST00000596933 147 ntBASIC2.4□□□□□ -2.03
ATF3P18847 Y_RNA.772-201ENST00000606692 102 ntBASIC2.4□□□□□ -2.03
ATF3P18847 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
ATF3P18847 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.4□□□□□ -2.03
ATF3P18847 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.4□□□□□ -2.03
ATF3P18847 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
ATF3P18847 Y_RNA.191-201ENST00000363972 113 ntBASIC2.39□□□□□ -2.03
ATF3P18847 Y_RNA.230-201ENST00000364348 109 ntBASIC2.39□□□□□ -2.03
ATF3P18847 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.39□□□□□ -2.03
ATF3P18847 AC044792.1-201ENST00000593294 196 ntBASIC2.39□□□□□ -2.03
ATF3P18847 AC008749.1-201ENST00000597650 306 ntBASIC2.39□□□□□ -2.03
ATF3P18847 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.39□□□□□ -2.03
ATF3P18847 AL627230.6-201ENST00000611129 280 ntBASIC2.39□□□□□ -2.03
ATF3P18847 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.39□□□□□ -2.03
ATF3P18847 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
ATF3P18847 RNU6-112P-201ENST00000363599 104 ntBASIC2.38□□□□□ -2.03
ATF3P18847 SNORA22B-201ENST00000383876 138 ntBASIC2.38□□□□□ -2.03
ATF3P18847 RNU6-20P-201ENST00000384106 107 ntBASIC2.38□□□□□ -2.03
ATF3P18847 RNU6-42P-201ENST00000384165 107 ntBASIC2.38□□□□□ -2.03
ATF3P18847 Y_RNA.458-201ENST00000384240 102 ntBASIC2.38□□□□□ -2.03
ATF3P18847 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.38□□□□□ -2.03
ATF3P18847 AC245047.4-201ENST00000433189 144 ntBASIC2.38□□□□□ -2.03
ATF3P18847 MTCYBP6-201ENST00000441810 138 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms