Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR302B-201ENST00000362188 73 ntBASIC3.37□□□□□ -1.87
NID1P14543 Y_RNA.93-201ENST00000363066 109 ntBASIC3.37□□□□□ -1.87
NID1P14543 RNU6-944P-201ENST00000364023 107 ntBASIC3.37□□□□□ -1.87
NID1P14543 Y_RNA.242-201ENST00000364473 110 ntBASIC3.37□□□□□ -1.87
NID1P14543 PGBD4P5-201ENST00000445958 426 ntBASIC3.37□□□□□ -1.87
NID1P14543 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
NID1P14543 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.37□□□□□ -1.87
NID1P14543 Y_RNA.666-201ENST00000516187 112 ntBASIC3.37□□□□□ -1.87
NID1P14543 RNU6-830P-201ENST00000516353 107 ntBASIC3.37□□□□□ -1.87
NID1P14543 RN7SKP282-201ENST00000516824 299 ntBASIC3.37□□□□□ -1.87
NID1P14543 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
NID1P14543 MIR5197-201ENST00000583721 112 ntBASIC3.37□□□□□ -1.87
NID1P14543 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NID1P14543 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NID1P14543 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
NID1P14543 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NID1P14543 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NID1P14543 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NID1P14543 Y_RNA.107-201ENST00000363190 121 ntBASIC3.36□□□□□ -1.87
NID1P14543 RNU6-690P-201ENST00000365242 106 ntBASIC3.36□□□□□ -1.87
NID1P14543 Y_RNA.342-201ENST00000365352 113 ntBASIC3.36□□□□□ -1.87
NID1P14543 RNU6-1274P-201ENST00000384557 107 ntBASIC3.36□□□□□ -1.87
NID1P14543 MIR548A2-201ENST00000384956 97 ntBASIC3.36□□□□□ -1.87
NID1P14543 SNRPGP10-201ENST00000432323 225 ntBASIC3.36□□□□□ -1.87
NID1P14543 SNRPGP13-201ENST00000442212 177 ntBASIC3.36□□□□□ -1.87
NID1P14543 AC068657.1-201ENST00000520807 306 ntBASIC3.36□□□□□ -1.87
NID1P14543 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.36□□□□□ -1.87
NID1P14543 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.36□□□□□ -1.87
NID1P14543 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NID1P14543 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NID1P14543 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NID1P14543 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.35□□□□□ -1.87
NID1P14543 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.35□□□□□ -1.87
NID1P14543 SNORA63D-201ENST00000364359 132 ntBASIC3.35□□□□□ -1.87
NID1P14543 RPS29P4-201ENST00000414733 161 ntBASIC3.35□□□□□ -1.87
NID1P14543 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
NID1P14543 RNU6-579P-201ENST00000516879 102 ntBASIC3.35□□□□□ -1.87
NID1P14543 RNU6-1231P-201ENST00000517185 103 ntBASIC3.35□□□□□ -1.87
NID1P14543 AC008507.4-201ENST00000585464 127 ntBASIC3.35□□□□□ -1.87
NID1P14543 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
NID1P14543 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NID1P14543 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NID1P14543 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NID1P14543 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NID1P14543 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.87
NID1P14543 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NID1P14543 TNPO1P3-201ENST00000436471 2662 ntBASIC3.34□□□□□ -1.87
NID1P14543 RNA5SP295-201ENST00000362655 121 ntBASIC3.34□□□□□ -1.87
NID1P14543 RNA5SP42-201ENST00000364278 115 ntBASIC3.34□□□□□ -1.87
NID1P14543 Z98941.1-201ENST00000407764 100 ntBASIC3.34□□□□□ -1.87
NID1P14543 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.34□□□□□ -1.87
NID1P14543 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
NID1P14543 AC104619.4-201ENST00000510773 249 ntBASIC3.34□□□□□ -1.87
NID1P14543 RNA5SP112-201ENST00000515937 99 ntBASIC3.34□□□□□ -1.87
NID1P14543 SNORA31.21-201ENST00000517180 77 ntBASIC3.34□□□□□ -1.87
NID1P14543 MIR4765-201ENST00000585007 77 ntBASIC3.34□□□□□ -1.87
NID1P14543 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
NID1P14543 AC090115.4-201ENST00000609970 188 ntBASIC3.34□□□□□ -1.87
NID1P14543 U6.98-201ENST00000637157 84 ntBASIC3.34□□□□□ -1.87
NID1P14543 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NID1P14543 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NID1P14543 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NID1P14543 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
NID1P14543 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
NID1P14543 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NID1P14543 MIR423-201ENST00000362201 94 ntBASIC3.33□□□□□ -1.88
NID1P14543 RNU6-486P-201ENST00000363116 107 ntBASIC3.33□□□□□ -1.88
NID1P14543 Y_RNA.253-201ENST00000364562 112 ntBASIC3.33□□□□□ -1.88
NID1P14543 Y_RNA.265-201ENST00000364677 108 ntBASIC3.33□□□□□ -1.88
NID1P14543 Y_RNA.344-201ENST00000365381 112 ntBASIC3.33□□□□□ -1.88
NID1P14543 AP000567.1-201ENST00000406413 156 ntBASIC3.33□□□□□ -1.88
NID1P14543 MIR1253-201ENST00000408273 105 ntBASIC3.33□□□□□ -1.88
NID1P14543 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.33□□□□□ -1.88
NID1P14543 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.33□□□□□ -1.88
NID1P14543 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
NID1P14543 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
NID1P14543 AC021443.1-201ENST00000604478 211 ntBASIC3.33□□□□□ -1.88
NID1P14543 MIR376A2-201ENST00000636782 80 ntBASIC3.33□□□□□ -1.88
NID1P14543 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.33□□□□□ -1.88
NID1P14543 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NID1P14543 AL049781.1-201ENST00000623195 3585 ntBASIC3.33□□□□□ -1.88
NID1P14543 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NID1P14543 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
NID1P14543 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NID1P14543 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NID1P14543 AL356274.2-201ENST00000624379 3752 ntBASIC3.32□□□□□ -1.88
NID1P14543 RNY1P10-201ENST00000363268 113 ntBASIC3.32□□□□□ -1.88
NID1P14543 RNA5SP51-201ENST00000364750 119 ntBASIC3.32□□□□□ -1.88
NID1P14543 MIR548D2-201ENST00000384955 97 ntBASIC3.32□□□□□ -1.88
NID1P14543 MIR518F-201ENST00000384973 87 ntBASIC3.32□□□□□ -1.88
NID1P14543 MIR34B-201ENST00000385076 84 ntBASIC3.32□□□□□ -1.88
NID1P14543 RNA5SP38-201ENST00000410750 119 ntBASIC3.32□□□□□ -1.88
NID1P14543 RHEBP3-201ENST00000411920 351 ntBASIC3.32□□□□□ -1.88
NID1P14543 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.32□□□□□ -1.88
NID1P14543 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.32□□□□□ -1.88
NID1P14543 AC087685.1-201ENST00000587507 141 ntBASIC3.32□□□□□ -1.88
NID1P14543 AC073413.2-201ENST00000604332 360 ntBASIC3.32□□□□□ -1.88
NID1P14543 AC022217.4-201ENST00000604389 163 ntBASIC3.32□□□□□ -1.88
NID1P14543 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.32□□□□□ -1.88
NID1P14543 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms