Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL6A2P12110 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
COL6A2P12110 AC096644.4-201ENST00000563417 2912 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
COL6A2P12110 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 SNORA71.1-201ENST00000364523 117 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 RNU6-851P-201ENST00000384565 107 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AC016909.1-201ENST00000415916 166 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.87□□□□□ -1.95
COL6A2P12110 RPL23AP94-201ENST00000512518 302 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 RNA5SP20-201ENST00000515976 84 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 MIR3910-1-201ENST00000580936 111 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 MIR4744-201ENST00000581563 82 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AP003357.1-201ENST00000604497 148 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 YPEL5P2-201ENST00000605553 359 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AC093732.2-201ENST00000607950 274 ntBASIC2.87□□□□□ -1.95
COL6A2P12110 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
COL6A2P12110 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
COL6A2P12110 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL6A2P12110 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
COL6A2P12110 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL6A2P12110 Y_RNA.182-201ENST00000363880 111 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 snoU2_19.4-201ENST00000364329 80 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 RNU6-275P-201ENST00000364910 107 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 SNORD50.2-201ENST00000365465 70 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 Y_RNA.500-201ENST00000384466 111 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.86□□□□□ -1.95
COL6A2P12110 SNORA9.3-201ENST00000516383 129 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC005972.2-201ENST00000604690 348 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AL355297.2-201ENST00000604792 129 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC004832.4-201ENST00000608952 331 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC013412.1-201ENST00000610687 192 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC104465.1-201ENST00000611365 139 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.86□□□□□ -1.95
COL6A2P12110 MIR548AY-201ENST00000617669 107 ntBASIC2.86□□□□□ -1.95
COL6A2P12110 CENPCP1-201ENST00000533085 2578 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 Y_RNA.272-201ENST00000364696 102 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MIR518C-201ENST00000384822 101 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MIR616-201ENST00000385293 97 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 RNU6-578P-201ENST00000390980 103 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 EBAG9P1-201ENST00000418955 543 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 HSPE1P21-201ENST00000438283 308 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 AC008885.1-201ENST00000514930 301 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 RNU7-116P-201ENST00000516940 62 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MTND5P41-201ENST00000517498 206 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MIR3605-201ENST00000583214 100 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MIR8057-201ENST00000620957 69 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 MIR6852-201ENST00000621699 66 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 AC068647.2-201ENST00000637380 353 ntBASIC2.85□□□□□ -1.95
COL6A2P12110 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.85□□□□□ -1.95
COL6A2P12110 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL6A2P12110 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
COL6A2P12110 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL6A2P12110 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL6A2P12110 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
COL6A2P12110 Y_RNA.24-201ENST00000362508 103 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 RNU4-84P-201ENST00000364200 139 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 RNU4-10P-201ENST00000364383 140 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 RNU6-407P-201ENST00000365280 104 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 RNU6-117P-201ENST00000365415 107 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 Y_RNA.398-201ENST00000383952 99 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 SNORD116-13-201ENST00000384408 92 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 MIR181A2-201ENST00000384863 110 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 AC025750.2-201ENST00000442609 450 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 AC117454.1-201ENST00000491120 168 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 Y_RNA.797-201ENST00000515977 94 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 RNU6-856P-201ENST00000516959 98 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.84□□□□□ -1.95
COL6A2P12110 MIR3124-201ENST00000582636 67 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 AL391903.3-201ENST00000612158 163 ntBASIC2.84□□□□□ -1.95
COL6A2P12110 MIR340-201ENST00000362125 95 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 MIR26A1-201ENST00000362205 77 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 SNORA36B-201ENST00000410438 131 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.83□□□□□ -1.96
COL6A2P12110 AC091826.1-201ENST00000514065 313 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 SNORA4.4-201ENST00000515921 135 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 SCARNA8-201ENST00000515924 131 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 AC127455.1-201ENST00000565496 145 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 MIR4724-201ENST00000579485 89 ntBASIC2.83□□□□□ -1.96
COL6A2P12110 AL157777.2-201ENST00000258070 137 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 AL356292.1-201ENST00000283110 373 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL6A2P12110 RNU6-743P-201ENST00000364151 106 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 Y_RNA.357-201ENST00000365487 109 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 RNU6-969P-201ENST00000383900 105 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 Y_RNA.572-201ENST00000384757 98 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 MIR613-201ENST00000385248 95 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 AL135786.1-201ENST00000415892 214 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.82□□□□□ -1.96
COL6A2P12110 RNU7-121P-201ENST00000516604 62 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 MIR4431-201ENST00000579990 94 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 MIR3117-201ENST00000584034 78 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 POLR3GP1-201ENST00000594073 261 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms