Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Z98949.2-201ENST00000440996 144 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 USP9YP29-201ENST00000445112 563 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.07□□□□□ -2.4
COL1A1P02452 AC010598.1-201ENST00000510378 103 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.07□□□□□ -2.4
COL1A1P02452 SNORA25.14-201ENST00000516481 132 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 RNA5SP454-201ENST00000517231 127 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AF235103.2-201ENST00000525753 346 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AP003716.2-201ENST00000528260 108 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.07□□□□□ -2.4
COL1A1P02452 AC104695.3-201ENST00000604052 296 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AL022161.1-201ENST00000604390 213 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AL162730.1-201ENST00000605734 292 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AC064836.2-201ENST00000609491 462 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 AC010608.3-201ENST00000625048 527 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 MIRLET7C-201ENST00000362160 84 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MIRLET7D-201ENST00000362263 87 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 RNU6-181P-201ENST00000363225 107 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 SNORD87-201ENST00000364849 89 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 RNU6-784P-201ENST00000384330 106 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 RNU6-517P-201ENST00000384362 110 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.06□□□□□ -2.4
COL1A1P02452 RNU6-994P-201ENST00000410507 111 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MTCO2P8-201ENST00000412213 658 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MRPS18CP6-201ENST00000423587 223 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 HSFY5P-201ENST00000453726 309 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MTND2P14-201ENST00000482139 351 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AF186996.7-201ENST00000492781 209 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.06□□□□□ -2.4
COL1A1P02452 SNORD111.1-201ENST00000516421 86 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 RNU6-445P-201ENST00000516949 107 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 RNU7-172P-201ENST00000517125 64 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MTND1P5-201ENST00000517906 940 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MTND4P7-201ENST00000523876 130 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.06□□□□□ -2.4
COL1A1P02452 AP002004.2-201ENST00000531656 154 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC023157.2-201ENST00000540596 141 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC093027.1-201ENST00000546698 429 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.06□□□□□ -2.4
COL1A1P02452 RPL23AP91-201ENST00000569211 455 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MTND1P8-201ENST00000571424 950 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 MIR4300-201ENST00000581016 96 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AC011458.1-201ENST00000604034 617 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.06□□□□□ -2.4
COL1A1P02452 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.06□□□□□ -2.4
COL1A1P02452 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
COL1A1P02452 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL1A1P02452 SNORD118-201ENST00000363593 134 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 RNU6-137P-201ENST00000363680 108 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 MIR520C-201ENST00000385005 87 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AL049545.1-201ENST00000401856 572 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 MIR1185-1-201ENST00000408598 86 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 MTCO3P19-201ENST00000415864 321 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 BX295541.1-201ENST00000417774 250 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.05□□□□□ -2.4
COL1A1P02452 MTCO2P34-201ENST00000421994 607 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AL593851.1-201ENST00000426171 157 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.05□□□□□ -2.4
COL1A1P02452 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.05□□□□□ -2.4
COL1A1P02452 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.05□□□□□ -2.4
COL1A1P02452 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.05□□□□□ -2.4
COL1A1P02452 RNU6-1096P-201ENST00000517089 102 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.05□□□□□ -2.4
COL1A1P02452 AC104383.1-201ENST00000530297 370 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AC141557.1-201ENST00000540982 400 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AC027288.2-201ENST00000553028 243 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 SCOCP1-201ENST00000554676 349 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 AC091178.2-201ENST00000584401 117 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 MIR8076-201ENST00000611401 83 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.05□□□□□ -2.4
COL1A1P02452 SNORA25.3-201ENST00000363205 127 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 SNORD115-8-201ENST00000363856 82 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 SNORD115-38-201ENST00000365037 82 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 Y_RNA.336-201ENST00000365307 109 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 RNY3-201ENST00000365484 102 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 RNU6-1329P-201ENST00000365664 107 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 Y_RNA.453-201ENST00000384223 109 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 MIR214-201ENST00000385214 110 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 MIR153-2-201ENST00000385225 87 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 MIR140-201ENST00000385282 100 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 RNU6-177P-201ENST00000411257 104 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.04□□□□□ -2.4
COL1A1P02452 MTCO2P18-201ENST00000457151 658 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 NDUFA4P2-201ENST00000489989 244 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AC074133.1-201ENST00000515696 183 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AP002963.1-201ENST00000530590 184 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AC026371.1-201ENST00000551867 419 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 HIF1AP1-201ENST00000553642 175 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AC090517.2-201ENST00000614966 680 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AC027279.3-201ENST00000625055 122 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 AC068137.4-201ENST00000638485 296 ntBASIC0.04□□□□□ -2.4
COL1A1P02452 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
COL1A1P02452 SNORA1B-201ENST00000362535 133 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 RNU6-1120P-201ENST00000362988 108 ntBASIC0.03□□□□□ -2.4
COL1A1P02452 RNU6-1214P-201ENST00000363650 109 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms