Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MIR5706-201ENST00000579841 80 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 SNORD92-201ENST00000585078 85 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 MIR6828-201ENST00000636181 60 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 MTND2P6-201ENST00000455337 1030 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 AC021146.9-201ENST00000512503 156 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 RNU6-377P-201ENST00000515965 102 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 uc_338.19-201ENST00000616808 99 ntBASIC-1.2□□□□□ -2.6
POLR1AO95602 RNA5SP48-201ENST00000363969 126 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 RNU6-692P-201ENST00000384496 107 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 AL365184.2-201ENST00000431139 435 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 RNU6-706P-201ENST00000517229 104 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 MTND2P38-201ENST00000522536 667 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 AP000753.3-201ENST00000604083 169 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 MIR6507-201ENST00000613630 70 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 snoZ196.1-201ENST00000625269 89 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 AC099654.8-201ENST00000637757 681 ntBASIC-1.21□□□□□ -2.6
POLR1AO95602 SNORA75.1-201ENST00000391130 148 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 MTCO2P33-201ENST00000402100 465 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 FCF1P9-201ENST00000412546 282 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.22□□□□□ -2.6
POLR1AO95602 AC008628.2-201ENST00000502605 298 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AC091951.3-201ENST00000504093 246 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.22□□□□□ -2.6
POLR1AO95602 AC103996.1-201ENST00000555468 102 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.22□□□□□ -2.6
POLR1AO95602 AC121334.2-201ENST00000605387 271 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AC006441.5-201ENST00000612680 209 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AC010975.3-201ENST00000618727 978 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 AC138649.3-201ENST00000622154 254 ntBASIC-1.22□□□□□ -2.6
POLR1AO95602 SNORD51.1-201ENST00000365405 77 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 MIR586-201ENST00000385035 97 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 RNU7-156P-201ENST00000517214 74 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 AC091178.2-201ENST00000584401 117 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 MIR501-201ENST00000390204 84 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
POLR1AO95602 MIR873-201ENST00000401120 77 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 AC008134.1-201ENST00000420943 193 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 AL049829.1-201ENST00000465411 156 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 RNA5SP216-201ENST00000516111 123 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.23□□□□□ -2.61
POLR1AO95602 AC138749.4-201ENST00000563970 127 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 MTND1P8-201ENST00000571424 950 ntBASIC-1.23□□□□□ -2.61
POLR1AO95602 RNU6-289P-201ENST00000364093 107 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 RNU6-371P-201ENST00000364283 108 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 RPL23AP30-201ENST00000432419 501 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.24□□□□□ -2.61
POLR1AO95602 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 RNA5SP66-201ENST00000517178 101 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 AP002004.2-201ENST00000531656 154 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.24□□□□□ -2.61
POLR1AO95602 AC018448.1-201ENST00000552843 316 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 AC006600.1-201ENST00000572529 153 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.24□□□□□ -2.61
POLR1AO95602 AL008636.1-201ENST00000625038 1018 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 MIR4251-201ENST00000635819 61 ntBASIC-1.24□□□□□ -2.61
POLR1AO95602 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 RNU6-946P-201ENST00000383878 107 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 AL355143.1-201ENST00000407101 841 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.25□□□□□ -2.61
POLR1AO95602 AC009237.7-201ENST00000447357 229 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.25□□□□□ -2.61
POLR1AO95602 AC021146.6-201ENST00000514659 117 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 RNU2-56P-201ENST00000516826 190 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 RNU7-128P-201ENST00000517247 62 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 AL512347.1-201ENST00000566420 503 ntBASIC-1.25□□□□□ -2.61
POLR1AO95602 MIR148A-201ENST00000362215 68 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-552P-201ENST00000362869 119 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 MIR204-201ENST00000385200 110 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC098592.1-201ENST00000419352 333 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AL353572.1-201ENST00000442490 417 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC046134.1-201ENST00000514454 666 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-58P-201ENST00000517143 103 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC006380.1-201ENST00000603598 186 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC097478.2-201ENST00000610572 514 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-960P-201ENST00000364056 120 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 MCFD2P1-201ENST00000417812 300 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AL117339.3-201ENST00000418733 162 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC012306.1-201ENST00000423267 114 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC015818.7-201ENST00000428754 109 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC087499.7-201ENST00000441958 109 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AL360271.2-201ENST00000447710 161 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.26□□□□□ -2.61
POLR1AO95602 MIR18B-201ENST00000454574 71 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-341P-201ENST00000516973 96 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 MIR5692A1-201ENST00000580523 69 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 MIR4264-201ENST00000583520 66 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 RNU1-29P-201ENST00000606574 126 ntBASIC-1.26□□□□□ -2.61
POLR1AO95602 MIR7844-201ENST00000616161 122 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms