Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.86□□□□□ -2.11
RTN3O95197 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.86□□□□□ -2.11
RTN3O95197 MIR4438-201ENST00000585271 93 ntBASIC1.86□□□□□ -2.11
RTN3O95197 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RTN3O95197 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
RTN3O95197 RNU6-1115P-201ENST00000362490 106 ntBASIC1.85□□□□□ -2.11
RTN3O95197 RNY3P11-201ENST00000364153 102 ntBASIC1.85□□□□□ -2.11
RTN3O95197 Y_RNA.269-201ENST00000364685 89 ntBASIC1.85□□□□□ -2.11
RTN3O95197 COX6CP10-201ENST00000416832 224 ntBASIC1.85□□□□□ -2.11
RTN3O95197 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
RTN3O95197 JTBP1-201ENST00000441314 247 ntBASIC1.85□□□□□ -2.11
RTN3O95197 FCF1P4-201ENST00000448326 183 ntBASIC1.85□□□□□ -2.11
RTN3O95197 Y_RNA.675-201ENST00000516389 149 ntBASIC1.85□□□□□ -2.11
RTN3O95197 RNU7-128P-201ENST00000517247 62 ntBASIC1.85□□□□□ -2.11
RTN3O95197 AC027419.1-201ENST00000522976 328 ntBASIC1.85□□□□□ -2.11
RTN3O95197 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
RTN3O95197 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
RTN3O95197 MIR4795-201ENST00000584182 89 ntBASIC1.85□□□□□ -2.11
RTN3O95197 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
RTN3O95197 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RTN3O95197 SNORA20B-201ENST00000384220 132 ntBASIC1.84□□□□□ -2.11
RTN3O95197 RNU6-950P-201ENST00000384651 107 ntBASIC1.84□□□□□ -2.11
RTN3O95197 SNORD78.2-201ENST00000391076 69 ntBASIC1.84□□□□□ -2.11
RTN3O95197 MIR934-201ENST00000401241 83 ntBASIC1.84□□□□□ -2.11
RTN3O95197 AF228730.4-201ENST00000421457 183 ntBASIC1.84□□□□□ -2.11
RTN3O95197 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN3O95197 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN3O95197 SUMO1P2-201ENST00000452524 304 ntBASIC1.84□□□□□ -2.11
RTN3O95197 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN3O95197 AC010469.2-201ENST00000496412 480 ntBASIC1.84□□□□□ -2.11
RTN3O95197 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.84□□□□□ -2.11
RTN3O95197 AP002001.1-203ENST00000534002 267 ntBASIC1.84□□□□□ -2.11
RTN3O95197 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN3O95197 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
RTN3O95197 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
RTN3O95197 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
RTN3O95197 AC138305.3-201ENST00000624988 240 ntBASIC1.84□□□□□ -2.11
RTN3O95197 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RTN3O95197 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTN3O95197 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTN3O95197 RNU6-271P-201ENST00000363858 105 ntBASIC1.83□□□□□ -2.12
RTN3O95197 Y_RNA.508-201ENST00000384502 114 ntBASIC1.83□□□□□ -2.12
RTN3O95197 RNA5SP109-201ENST00000391010 116 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AL355796.1-201ENST00000406706 323 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AC022028.1-201ENST00000412054 408 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
RTN3O95197 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
RTN3O95197 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
RTN3O95197 AC027575.1-201ENST00000481064 460 ntBASIC1.83□□□□□ -2.12
RTN3O95197 RNU6-408P-201ENST00000515910 100 ntBASIC1.83□□□□□ -2.12
RTN3O95197 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.83□□□□□ -2.12
RTN3O95197 HSBP1P1-201ENST00000555205 166 ntBASIC1.83□□□□□ -2.12
RTN3O95197 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
RTN3O95197 VN1R91P-201ENST00000594377 169 ntBASIC1.83□□□□□ -2.12
RTN3O95197 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
RTN3O95197 RNU4-79P-201ENST00000362764 141 ntBASIC1.82□□□□□ -2.12
RTN3O95197 SNORA4.2-201ENST00000365313 147 ntBASIC1.82□□□□□ -2.12
RTN3O95197 RNU6-926P-201ENST00000384075 107 ntBASIC1.82□□□□□ -2.12
RTN3O95197 RNU11-5P-201ENST00000391216 129 ntBASIC1.82□□□□□ -2.12
RTN3O95197 MTCO3P19-201ENST00000415864 321 ntBASIC1.82□□□□□ -2.12
RTN3O95197 RNU6-976P-201ENST00000516086 111 ntBASIC1.82□□□□□ -2.12
RTN3O95197 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
RTN3O95197 AC006600.1-201ENST00000572529 153 ntBASIC1.82□□□□□ -2.12
RTN3O95197 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
RTN3O95197 U6.115-201ENST00000636045 103 ntBASIC1.82□□□□□ -2.12
RTN3O95197 AC100821.1-201ENST00000523153 2479 ntBASIC1.82□□□□□ -2.12
RTN3O95197 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
RTN3O95197 SNORA27.1-201ENST00000362604 124 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RNU6-454P-201ENST00000364292 107 ntBASIC1.81□□□□□ -2.12
RTN3O95197 Y_RNA.315-201ENST00000365117 102 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RPL21P1-201ENST00000399532 476 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AC096644.2-201ENST00000429278 159 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AC097462.1-201ENST00000514125 324 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RNU6-1012P-201ENST00000516606 109 ntBASIC1.81□□□□□ -2.12
RTN3O95197 RAB11AP2-201ENST00000545905 639 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AL117336.2-201ENST00000602435 335 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AC016925.2-201ENST00000605108 242 ntBASIC1.81□□□□□ -2.12
RTN3O95197 snoU13.31-201ENST00000607291 104 ntBASIC1.81□□□□□ -2.12
RTN3O95197 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.81□□□□□ -2.12
RTN3O95197 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AL138825.1-201ENST00000618587 192 ntBASIC1.81□□□□□ -2.12
RTN3O95197 AC091925.1-201ENST00000623204 462 ntBASIC1.81□□□□□ -2.12
RTN3O95197 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.81□□□□□ -2.12
RTN3O95197 MIR4272-201ENST00000635924 64 ntBASIC1.81□□□□□ -2.12
RTN3O95197 Y_RNA.27-201ENST00000362540 103 ntBASIC1.8□□□□□ -2.12
RTN3O95197 Y_RNA.252-201ENST00000364556 101 ntBASIC1.8□□□□□ -2.12
RTN3O95197 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
RTN3O95197 RNU6-407P-201ENST00000365280 104 ntBASIC1.8□□□□□ -2.12
RTN3O95197 SNORA17.3-201ENST00000391159 129 ntBASIC1.8□□□□□ -2.12
RTN3O95197 MRPL35P1-201ENST00000404272 572 ntBASIC1.8□□□□□ -2.12
RTN3O95197 AL606517.2-201ENST00000442855 241 ntBASIC1.8□□□□□ -2.12
RTN3O95197 RNU7-34P-201ENST00000459394 64 ntBASIC1.8□□□□□ -2.12
RTN3O95197 Y_RNA.661-201ENST00000516003 99 ntBASIC1.8□□□□□ -2.12
RTN3O95197 RNU7-172P-201ENST00000517125 64 ntBASIC1.8□□□□□ -2.12
RTN3O95197 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms