Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.46□□□□□ -2.34
SHOX2O60902 CALM2P4-201ENST00000430810 426 ntBASIC0.46□□□□□ -2.34
SHOX2O60902 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.46□□□□□ -2.34
SHOX2O60902 AC025627.3-201ENST00000582078 182 ntBASIC0.46□□□□□ -2.34
SHOX2O60902 RNU6-137P-201ENST00000363680 108 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 SNORD115-32-201ENST00000364079 82 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SHOX2O60902 Y_RNA.552-201ENST00000384665 112 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AL663109.1-201ENST00000411498 844 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AL358934.1-201ENST00000432346 324 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.45□□□□□ -2.34
SHOX2O60902 TPT1P7-201ENST00000458300 517 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.45□□□□□ -2.34
SHOX2O60902 SNORD111.1-201ENST00000516421 86 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 RNU2-56P-201ENST00000516826 190 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 FRG2DP-202ENST00000566967 323 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AC092747.3-201ENST00000603769 301 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AL391903.3-201ENST00000612158 163 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 AL354950.2-201ENST00000617939 290 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 MIR6079-201ENST00000635807 62 ntBASIC0.45□□□□□ -2.34
SHOX2O60902 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 U8.16-201ENST00000391279 133 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 SNORA26.8-201ENST00000391306 124 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 RNU2-70P-201ENST00000410718 179 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 Y_RNA.644-201ENST00000459006 113 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 SNORA19.2-201ENST00000516013 114 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 RNU7-12P-201ENST00000516030 62 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 SNORA25.14-201ENST00000516481 132 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 AC022868.1-201ENST00000517767 391 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 AC100830.2-201ENST00000581636 240 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 MIR5692C1-201ENST00000585309 91 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 AC017083.3-201ENST00000609955 700 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
SHOX2O60902 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
SHOX2O60902 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 SNORD87-201ENST00000364849 89 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 RNU4-9P-201ENST00000364951 139 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 RNY3P9-201ENST00000384727 106 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 MIR604-201ENST00000384880 94 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SHOX2O60902 RNA5SP482-201ENST00000391269 118 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 MTCO3P19-201ENST00000415864 321 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 MRPS10P2-201ENST00000431226 381 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 U7.7-201ENST00000459276 60 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 OR9P1P-201ENST00000496431 281 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 RNU6-58P-201ENST00000517143 103 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 AC060788.1-201ENST00000521318 469 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 AC108676.2-201ENST00000605225 163 ntBASIC0.43□□□□□ -2.34
SHOX2O60902 RNU4-73P-201ENST00000363164 141 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 Y_RNA.319-201ENST00000365138 92 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 MIR487A-201ENST00000385009 80 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 AC073464.1-201ENST00000429823 534 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.42□□□□□ -2.34
SHOX2O60902 AC093019.1-201ENST00000443135 252 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.42□□□□□ -2.34
SHOX2O60902 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.42□□□□□ -2.34
SHOX2O60902 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.42□□□□□ -2.34
SHOX2O60902 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.42□□□□□ -2.34
SHOX2O60902 RPL21P9-201ENST00000556149 474 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.42□□□□□ -2.34
SHOX2O60902 Z94722.1-201ENST00000604328 474 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 AL050303.3-201ENST00000613704 284 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.42□□□□□ -2.34
SHOX2O60902 RNU6-280P-201ENST00000364145 104 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 RNU6-1103P-201ENST00000384150 107 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 MIR153-2-201ENST00000385225 87 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 SNORD37.1-201ENST00000390968 65 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 MIR1207-201ENST00000408249 87 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.41□□□□□ -2.34
SHOX2O60902 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 MTCO2P16-201ENST00000436962 677 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC104332.1-201ENST00000440471 797 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.41□□□□□ -2.34
SHOX2O60902 AC010598.1-201ENST00000510378 103 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 RNU6-341P-201ENST00000516973 96 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC027419.1-201ENST00000522976 328 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.41□□□□□ -2.34
SHOX2O60902 AP002004.2-201ENST00000531656 154 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 RNY1P9-201ENST00000532431 109 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.41□□□□□ -2.34
SHOX2O60902 MIR4305-201ENST00000583252 102 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AL096861.1-201ENST00000610899 123 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
SHOX2O60902 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
SHOX2O60902 Y_RNA.415-201ENST00000384012 112 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 SNORA51.10-201ENST00000384418 136 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 MIR32-201ENST00000384965 70 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 RNU6-1158P-201ENST00000391167 107 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.4□□□□□ -2.35
SHOX2O60902 MTND4P18-201ENST00000447010 465 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC093850.1-201ENST00000454121 251 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC233266.1-201ENST00000454518 96 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 SNORD65B-201ENST00000459126 73 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC091885.1-201ENST00000506658 268 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms