Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC004467.1-201ENST00000615678 330 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AC091812.1-201ENST00000432235 1948 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AC092881.1-201ENST00000638218 2733 ntBASIC1.73□□□□□ -2.13
SSX4O60224 SNORA72.2-201ENST00000365028 127 ntBASIC1.73□□□□□ -2.13
SSX4O60224 RNU6-20P-201ENST00000384106 107 ntBASIC1.73□□□□□ -2.13
SSX4O60224 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
SSX4O60224 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
SSX4O60224 RNA5SP323-201ENST00000391094 133 ntBASIC1.73□□□□□ -2.13
SSX4O60224 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
SSX4O60224 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.73□□□□□ -2.13
SSX4O60224 MTND1P14-201ENST00000427400 950 ntBASIC1.73□□□□□ -2.13
SSX4O60224 MTCO2P12-201ENST00000427426 682 ntBASIC1.73□□□□□ -2.13
SSX4O60224 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
SSX4O60224 RNU1-142P-201ENST00000516682 145 ntBASIC1.73□□□□□ -2.13
SSX4O60224 AC023157.2-201ENST00000540596 141 ntBASIC1.73□□□□□ -2.13
SSX4O60224 RPS29P30-201ENST00000600975 111 ntBASIC1.73□□□□□ -2.13
SSX4O60224 AL359075.3-201ENST00000613288 217 ntBASIC1.73□□□□□ -2.13
SSX4O60224 U6.73-201ENST00000619194 103 ntBASIC1.73□□□□□ -2.13
SSX4O60224 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.73□□□□□ -2.13
SSX4O60224 U6.115-201ENST00000636045 103 ntBASIC1.73□□□□□ -2.13
SSX4O60224 U6.108-201ENST00000637764 58 ntBASIC1.73□□□□□ -2.13
SSX4O60224 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
SSX4O60224 RNU6-626P-201ENST00000363354 107 ntBASIC1.72□□□□□ -2.13
SSX4O60224 Y_RNA.128-201ENST00000363391 112 ntBASIC1.72□□□□□ -2.13
SSX4O60224 SNORA63D-201ENST00000364359 132 ntBASIC1.72□□□□□ -2.13
SSX4O60224 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
SSX4O60224 RNU6-1186P-201ENST00000410429 97 ntBASIC1.72□□□□□ -2.13
SSX4O60224 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
SSX4O60224 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
SSX4O60224 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
SSX4O60224 RPS27P22-201ENST00000478056 241 ntBASIC1.72□□□□□ -2.13
SSX4O60224 AL163195.1-201ENST00000496941 348 ntBASIC1.72□□□□□ -2.13
SSX4O60224 RNU6-475P-201ENST00000516073 104 ntBASIC1.72□□□□□ -2.13
SSX4O60224 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
SSX4O60224 AC024995.1-201ENST00000523014 93 ntBASIC1.72□□□□□ -2.13
SSX4O60224 GNAI2P1-201ENST00000541815 315 ntBASIC1.72□□□□□ -2.13
SSX4O60224 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
SSX4O60224 MIR3684-201ENST00000579779 74 ntBASIC1.72□□□□□ -2.13
SSX4O60224 MIR4438-201ENST00000585271 93 ntBASIC1.72□□□□□ -2.13
SSX4O60224 AC006435.5-201ENST00000624486 112 ntBASIC1.72□□□□□ -2.13
SSX4O60224 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
SSX4O60224 AC134503.1-201ENST00000633048 54 ntBASIC1.72□□□□□ -2.13
SSX4O60224 AC005592.1-201ENST00000566527 1640 ntBASIC1.72□□□□□ -2.13
SSX4O60224 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSX4O60224 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SSX4O60224 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SSX4O60224 Y_RNA.28-201ENST00000362554 111 ntBASIC1.71□□□□□ -2.14
SSX4O60224 Y_RNA.458-201ENST00000384240 102 ntBASIC1.71□□□□□ -2.14
SSX4O60224 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SSX4O60224 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR1302-11-201ENST00000408051 138 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR1302-9-201ENST00000408365 138 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR1302-10-201ENST00000408734 138 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AC005002.2-201ENST00000438228 269 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AL603825.1-201ENST00000438481 80 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AC069257.2-201ENST00000441819 155 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MRPS10P1-201ENST00000448483 130 ntBASIC1.71□□□□□ -2.14
SSX4O60224 SNORA25.10-201ENST00000515926 124 ntBASIC1.71□□□□□ -2.14
SSX4O60224 RNU7-128P-201ENST00000517247 62 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AC040926.1-201ENST00000530195 238 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AC005176.2-201ENST00000596933 147 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR1302-2-201ENST00000607096 138 ntBASIC1.71□□□□□ -2.14
SSX4O60224 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.71□□□□□ -2.14
SSX4O60224 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
SSX4O60224 AC010205.1-201ENST00000616668 449 ntBASIC1.71□□□□□ -2.14
SSX4O60224 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
SSX4O60224 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SSX4O60224 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SSX4O60224 Y_RNA.101-201ENST00000363154 102 ntBASIC1.7□□□□□ -2.14
SSX4O60224 Y_RNA.148-201ENST00000363557 117 ntBASIC1.7□□□□□ -2.14
SSX4O60224 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
SSX4O60224 SNORD14.1-201ENST00000365609 90 ntBASIC1.7□□□□□ -2.14
SSX4O60224 RNU2-2P-201ENST00000410396 191 ntBASIC1.7□□□□□ -2.14
SSX4O60224 EBAG9P1-201ENST00000418955 543 ntBASIC1.7□□□□□ -2.14
SSX4O60224 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
SSX4O60224 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX4O60224 AC093852.1-201ENST00000503587 266 ntBASIC1.7□□□□□ -2.14
SSX4O60224 RNU2-12P-201ENST00000517216 168 ntBASIC1.7□□□□□ -2.14
SSX4O60224 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX4O60224 MIR5089-201ENST00000580047 84 ntBASIC1.7□□□□□ -2.14
SSX4O60224 AL121655.1-201ENST00000605811 308 ntBASIC1.7□□□□□ -2.14
SSX4O60224 AC005828.6-201ENST00000606610 232 ntBASIC1.7□□□□□ -2.14
SSX4O60224 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
SSX4O60224 SNORA27.1-201ENST00000362604 124 ntBASIC1.69□□□□□ -2.14
SSX4O60224 Y_RNA.243-201ENST00000364481 109 ntBASIC1.69□□□□□ -2.14
SSX4O60224 RNU6-407P-201ENST00000365280 104 ntBASIC1.69□□□□□ -2.14
SSX4O60224 Y_RNA.424-201ENST00000384063 103 ntBASIC1.69□□□□□ -2.14
SSX4O60224 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
SSX4O60224 Y_RNA.526-201ENST00000384572 110 ntBASIC1.69□□□□□ -2.14
SSX4O60224 MIR548P-201ENST00000408336 84 ntBASIC1.69□□□□□ -2.14
SSX4O60224 AC073910.1-201ENST00000445047 438 ntBASIC1.69□□□□□ -2.14
SSX4O60224 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.69□□□□□ -2.14
SSX4O60224 RNA5SP20-201ENST00000515976 84 ntBASIC1.69□□□□□ -2.14
SSX4O60224 RNU7-99P-201ENST00000516271 62 ntBASIC1.69□□□□□ -2.14
SSX4O60224 Y_RNA.701-201ENST00000516812 110 ntBASIC1.69□□□□□ -2.14
SSX4O60224 RNU6-988P-201ENST00000519081 107 ntBASIC1.69□□□□□ -2.14
SSX4O60224 AL390123.1-201ENST00000603216 237 ntBASIC1.69□□□□□ -2.14
SSX4O60224 Y_RNA.772-201ENST00000606692 102 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms