Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CUX2O14529 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.32□□□□□ -2.2
CUX2O14529 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.32□□□□□ -2.2
CUX2O14529 SNORD87-201ENST00000364849 89 ntBASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
CUX2O14529 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-1186P-201ENST00000410429 97 ntBASIC1.31□□□□□ -2.2
CUX2O14529 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-566P-201ENST00000516790 107 ntBASIC1.31□□□□□ -2.2
CUX2O14529 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.31□□□□□ -2.2
CUX2O14529 AL078604.3-201ENST00000615580 211 ntBASIC1.31□□□□□ -2.2
CUX2O14529 AC090617.10-201ENST00000624308 134 ntBASIC1.31□□□□□ -2.2
CUX2O14529 Y_RNA.89-201ENST00000363031 102 ntBASIC1.31□□□□□ -2.2
CUX2O14529 U3.8-201ENST00000363675 217 ntBASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-873P-201ENST00000363833 107 ntBASIC1.31□□□□□ -2.2
CUX2O14529 Y_RNA.318-201ENST00000365131 97 ntBASIC1.31□□□□□ -2.2
CUX2O14529 SNORA4.2-201ENST00000365313 147 ntBASIC1.31□□□□□ -2.2
CUX2O14529 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-159P-201ENST00000391080 106 ntBASIC1.31□□□□□ -2.2
CUX2O14529 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
CUX2O14529 USMG5P1-201ENST00000425964 177 ntBASIC1.31□□□□□ -2.2
CUX2O14529 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.31□□□□□ -2.2
CUX2O14529 AC027119.1-201ENST00000440877 241 ntBASIC1.31□□□□□ -2.2
CUX2O14529 NDUFB4P10-201ENST00000452541 359 ntBASIC1.31□□□□□ -2.2
CUX2O14529 RNU7-66P-201ENST00000459469 62 ntBASIC1.31□□□□□ -2.2
CUX2O14529 RPL30P10-201ENST00000488148 337 ntBASIC1.31□□□□□ -2.2
CUX2O14529 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CUX2O14529 RNU6-720P-201ENST00000516363 108 ntBASIC1.31□□□□□ -2.2
CUX2O14529 MIR3942-201ENST00000585264 109 ntBASIC1.31□□□□□ -2.2
CUX2O14529 AC023932.2-201ENST00000603176 175 ntBASIC1.31□□□□□ -2.2
CUX2O14529 MIR6128-201ENST00000615528 109 ntBASIC1.31□□□□□ -2.2
CUX2O14529 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
CUX2O14529 Y_RNA.3-201ENST00000362331 103 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNU6-1266P-201ENST00000362794 105 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNU6-596P-201ENST00000365395 98 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNU6-306P-201ENST00000384617 107 ntBASIC1.3□□□□□ -2.2
CUX2O14529 MIR194-1-201ENST00000384892 85 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNA5SP118-201ENST00000410385 109 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNU6-864P-201ENST00000516256 108 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNU6-1088P-201ENST00000516850 104 ntBASIC1.3□□□□□ -2.2
CUX2O14529 RNA5SP454-201ENST00000517231 127 ntBASIC1.3□□□□□ -2.2
CUX2O14529 UBL5P4-201ENST00000562584 236 ntBASIC1.3□□□□□ -2.2
CUX2O14529 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.3□□□□□ -2.2
CUX2O14529 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.135-201ENST00000363439 95 ntBASIC1.29□□□□□ -2.2
CUX2O14529 SNORD114-2-201ENST00000363953 78 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNA5SP499-201ENST00000363982 119 ntBASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.405-201ENST00000383979 100 ntBASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.450-201ENST00000384198 113 ntBASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.451-201ENST00000384200 100 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNU6-793P-201ENST00000384233 104 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.524-201ENST00000384564 100 ntBASIC1.29□□□□□ -2.2
CUX2O14529 Y_RNA.561-201ENST00000384694 100 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
CUX2O14529 MRPL35P1-201ENST00000404272 572 ntBASIC1.29□□□□□ -2.2
CUX2O14529 AC010154.1-201ENST00000425857 269 ntBASIC1.29□□□□□ -2.2
CUX2O14529 AC092628.1-201ENST00000436250 252 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNU7-34P-201ENST00000459394 64 ntBASIC1.29□□□□□ -2.2
CUX2O14529 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.29□□□□□ -2.2
CUX2O14529 RNU6-107P-201ENST00000516643 102 ntBASIC1.29□□□□□ -2.2
CUX2O14529 RNU6-1314P-201ENST00000517139 104 ntBASIC1.29□□□□□ -2.2
CUX2O14529 SUMO2P16-201ENST00000519475 264 ntBASIC1.29□□□□□ -2.2
CUX2O14529 MZT1P2-201ENST00000604387 248 ntBASIC1.29□□□□□ -2.2
CUX2O14529 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
CUX2O14529 MIR3662-201ENST00000637030 95 ntBASIC1.29□□□□□ -2.2
CUX2O14529 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CUX2O14529 SNORA33-201ENST00000363664 130 ntBASIC1.28□□□□□ -2.2
CUX2O14529 RNA5SP259-201ENST00000365541 109 ntBASIC1.28□□□□□ -2.2
CUX2O14529 Y_RNA.533-201ENST00000384596 114 ntBASIC1.28□□□□□ -2.2
CUX2O14529 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
CUX2O14529 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.28□□□□□ -2.2
CUX2O14529 AL442163.3-201ENST00000554110 156 ntBASIC1.28□□□□□ -2.2
CUX2O14529 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
CUX2O14529 AC010999.1-201ENST00000611856 324 ntBASIC1.28□□□□□ -2.2
CUX2O14529 U4.5-201ENST00000617137 123 ntBASIC1.28□□□□□ -2.2
CUX2O14529 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
CUX2O14529 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.28□□□□□ -2.2
CUX2O14529 Y_RNA.157-201ENST00000363638 102 ntBASIC1.27□□□□□ -2.21
CUX2O14529 RNU6-831P-201ENST00000384548 107 ntBASIC1.27□□□□□ -2.21
CUX2O14529 RNU6-510P-201ENST00000391239 108 ntBASIC1.27□□□□□ -2.21
CUX2O14529 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.27□□□□□ -2.21
CUX2O14529 snoU13.19-201ENST00000459148 104 ntBASIC1.27□□□□□ -2.21
CUX2O14529 AC134698.4-201ENST00000523451 826 ntBASIC1.27□□□□□ -2.21
CUX2O14529 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.27□□□□□ -2.21
CUX2O14529 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
CUX2O14529 EIF1P4-201ENST00000572664 335 ntBASIC1.27□□□□□ -2.21
CUX2O14529 AL929325.1-201ENST00000603096 117 ntBASIC1.27□□□□□ -2.21
CUX2O14529 MIR302D-201ENST00000362275 68 ntBASIC1.26□□□□□ -2.21
CUX2O14529 Y_RNA.301-201ENST00000364990 103 ntBASIC1.26□□□□□ -2.21
CUX2O14529 Y_RNA.415-201ENST00000384012 112 ntBASIC1.26□□□□□ -2.21
CUX2O14529 RNU6-440P-201ENST00000390882 105 ntBASIC1.26□□□□□ -2.21
CUX2O14529 EIF1P1-201ENST00000421436 341 ntBASIC1.26□□□□□ -2.21
CUX2O14529 USP9YP30-201ENST00000430729 455 ntBASIC1.26□□□□□ -2.21
CUX2O14529 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.26□□□□□ -2.21
CUX2O14529 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.26□□□□□ -2.21
CUX2O14529 RNU7-99P-201ENST00000516271 62 ntBASIC1.26□□□□□ -2.21
CUX2O14529 Y_RNA.682-201ENST00000516457 100 ntBASIC1.26□□□□□ -2.21
CUX2O14529 Y_RNA.706-201ENST00000516933 99 ntBASIC1.26□□□□□ -2.21
CUX2O14529 AL121579.1-201ENST00000555129 305 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms