Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 snoU13.6-201ENST00000458785 104 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 snoU13.16-201ENST00000459350 104 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 MTND3P25-201ENST00000509243 135 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 RNU6-469P-201ENST00000516253 101 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 RNU6-430P-201ENST00000517078 107 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AP002004.2-201ENST00000531656 154 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AC138749.4-201ENST00000563970 127 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 MIR4438-201ENST00000585271 93 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AC073539.2-201ENST00000597113 165 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 AL162376.1-201ENST00000624117 175 ntBASIC-1.03□□□□□ -2.57
TRAV30A0A087WSZ9 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 AC243428.1-201ENST00000421099 264 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 MTCO1P27-201ENST00000448269 226 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 SNORA18.4-201ENST00000516440 124 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 AP003168.1-201ENST00000530091 307 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 AC144521.1-201ENST00000607148 956 ntBASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.04□□□□□ -2.58
TRAV30A0A087WSZ9 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-607P-201ENST00000411283 108 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 Z95118.1-201ENST00000421372 247 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 MRPS10P1-201ENST00000448483 130 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 RNU7-185P-201ENST00000459215 60 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 AC091959.1-201ENST00000495857 238 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 AC074198.2-201ENST00000508153 258 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-758P-201ENST00000516292 89 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 MIR548AR-201ENST00000582191 57 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 MIR544B-201ENST00000582372 78 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 MIR4264-201ENST00000583520 66 ntBASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.05□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-873P-201ENST00000363833 107 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-25P-201ENST00000383873 107 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-48P-201ENST00000384161 107 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-15P-201ENST00000384534 107 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-29P-201ENST00000384637 107 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 ELOCP17-201ENST00000414751 326 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AL953862.1-201ENST00000423016 168 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC093303.1-201ENST00000514549 295 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC068587.4-201ENST00000533893 186 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC026470.2-201ENST00000561492 181 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 Z94722.1-201ENST00000604328 474 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AL078596.1-201ENST00000624856 447 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 AC010608.3-201ENST00000625048 527 ntBASIC-1.06□□□□□ -2.58
TRAV30A0A087WSZ9 RNY3P13-201ENST00000365542 102 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 MIR570-201ENST00000384917 97 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 RNU7-182P-201ENST00000459009 62 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC010486.3-201ENST00000511602 785 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 SNORA31.14-201ENST00000516728 116 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 RNA5SP66-201ENST00000517178 101 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC090572.1-201ENST00000519251 160 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 MIR378D2-201ENST00000580636 98 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 FGF7P1-201ENST00000582820 288 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC087685.1-201ENST00000587507 141 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AP000753.3-201ENST00000604083 169 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC099785.1-201ENST00000605697 437 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC012467.1-201ENST00000607740 256 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC023158.2-201ENST00000614876 543 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AC078880.5-201ENST00000617845 421 ntBASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.07□□□□□ -2.58
TRAV30A0A087WSZ9 AL445523.1-201ENST00000451184 1362 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC010332.2-201ENST00000613083 1904 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 MTCO2P33-201ENST00000402100 465 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AL390729.2-201ENST00000416137 156 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC090844.1-201ENST00000422019 156 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 MTND4LP7-201ENST00000431728 294 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 EPS15P1-201ENST00000448836 336 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC097462.1-201ENST00000514125 324 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC006600.1-201ENST00000572529 153 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 MIR5706-201ENST00000579841 80 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC108676.2-201ENST00000605225 163 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC069545.1-201ENST00000605671 358 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 MIR6740-201ENST00000618268 113 ntBASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.08□□□□□ -2.58
TRAV30A0A087WSZ9 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.09□□□□□ -2.58
TRAV30A0A087WSZ9 U8.6-201ENST00000364939 135 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms