Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-430P-201ENST00000517078 107 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 MRPS36P4-201ENST00000534436 298 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 MIR4703-201ENST00000577728 79 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 MIR4300-201ENST00000581016 96 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 uc_338.34-201ENST00000617467 174 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 AC006927.3-201ENST00000638789 384 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 SNORD73A-201ENST00000386062 65 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 MTND3P9-201ENST00000429526 346 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 GPR143P-201ENST00000434155 205 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 MTCO3P10-201ENST00000455912 772 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 HMGN2P26-201ENST00000463169 339 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 AF186996.7-201ENST00000492781 209 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRIM4Q9C037 RN7SKP164-201ENST00000516138 266 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRIM4Q9C037 SNORD11B-201ENST00000607707 90 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 AC007684.1-201ENST00000609671 477 ntBASIC-0.04□□□□□ -2.42
TRIM4Q9C037 SNORD49B-201ENST00000365172 72 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 MIR573-201ENST00000384964 99 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 MIR487A-201ENST00000385009 80 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 MRPS10P1-201ENST00000448483 130 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AP001372.4-201ENST00000524889 472 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AC023157.2-201ENST00000540596 141 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AL162730.1-201ENST00000605734 292 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AC090517.2-201ENST00000614966 680 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AC137590.2-201ENST00000619709 240 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 AL008636.1-201ENST00000625038 1018 ntBASIC-0.05□□□□□ -2.42
TRIM4Q9C037 MIR1-1-201ENST00000362147 71 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 SNORD87-201ENST00000364849 89 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 RNU6-906P-201ENST00000384700 70 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 MIR1-2-201ENST00000384961 85 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 MIR1468-201ENST00000410600 86 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 snoU109.3-201ENST00000459477 145 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 RNU7-41P-201ENST00000515917 61 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 MTND1P5-201ENST00000517906 940 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
TRIM4Q9C037 MIR3941-201ENST00000582572 103 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 uc_338.11-201ENST00000619132 160 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AC015726.2-201ENST00000620112 122 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 AC092634.7-201ENST00000621022 103 ntBASIC-0.06□□□□□ -2.42
TRIM4Q9C037 MIR18A-201ENST00000362310 71 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 SNORA1B-201ENST00000362535 133 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 SNORD118-201ENST00000363593 134 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 SNORD113.3-201ENST00000364630 78 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 RNA5SP482-201ENST00000391269 118 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 MIR891A-201ENST00000401237 79 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 RNU7-167P-201ENST00000459160 62 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AC091133.4-201ENST00000511142 308 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AC074133.1-201ENST00000515696 183 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AC104383.1-201ENST00000530297 370 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AC093027.1-201ENST00000546698 429 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 AK6P2-201ENST00000549020 471 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 HIF1AP1-201ENST00000553642 175 ntBASIC-0.07□□□□□ -2.42
TRIM4Q9C037 MTND4P9-201ENST00000507819 1346 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 RNU6-514P-201ENST00000384208 107 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AC091021.1-201ENST00000468051 388 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRIM4Q9C037 MTND1P22-201ENST00000510572 951 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AC105417.1-201ENST00000514691 285 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
TRIM4Q9C037 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRIM4Q9C037 EIF1P4-201ENST00000572664 335 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 FGF7P1-201ENST00000582820 288 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 OR5AK4P-201ENST00000635912 903 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 MIR4315-1-201ENST00000636800 73 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 MIR4315-2-201ENST00000640925 73 ntBASIC-0.08□□□□□ -2.42
TRIM4Q9C037 RNU6-833P-201ENST00000363486 107 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 SNORD114-28-201ENST00000363610 72 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 MIR153-2-201ENST00000385225 87 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 MIR450B-201ENST00000401182 78 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.09□□□□□ -2.42
TRIM4Q9C037 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.09□□□□□ -2.42
TRIM4Q9C037 SNORD65B-201ENST00000459126 73 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 snoU13.11-201ENST00000459219 104 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.09□□□□□ -2.42
TRIM4Q9C037 AC005178.1-201ENST00000508392 440 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms