Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
UPK3BQ9BT76 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.179-201ENST00000363844 90 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.184-201ENST00000363884 108 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 MIR598-201ENST00000384868 97 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 MIR92A1-201ENST00000385233 78 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 RNU1-139P-201ENST00000391307 165 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.41□□□□□ -2.34
UPK3BQ9BT76 MTCO3P19-201ENST00000415864 321 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.41□□□□□ -2.34
UPK3BQ9BT76 Z82188.1-201ENST00000436709 154 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 MTND4P18-201ENST00000447010 465 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC079354.2-201ENST00000453523 154 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC245047.8-201ENST00000456455 284 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 OR9P1P-201ENST00000496431 281 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.41□□□□□ -2.34
UPK3BQ9BT76 RNU7-172P-201ENST00000517125 64 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AL512605.2-201ENST00000592972 256 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC068137.4-201ENST00000638485 296 ntBASIC0.41□□□□□ -2.34
UPK3BQ9BT76 AC121333.1-201ENST00000567488 2709 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 SNORD113-7-201ENST00000363762 77 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.267-201ENST00000364679 109 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 RNA5SP482-201ENST00000391269 118 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AL035398.1-201ENST00000430869 322 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 PCMTD1P1-201ENST00000455560 355 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AC091179.3-201ENST00000474761 144 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 MTCO2P30-201ENST00000503662 364 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AC113410.1-201ENST00000505029 247 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 SNORA70.12-201ENST00000516084 153 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.4□□□□□ -2.35
UPK3BQ9BT76 MTND1P15-201ENST00000579262 949 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 7SK.7-201ENST00000603504 247 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AC004832.4-201ENST00000608952 331 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AL158209.2-201ENST00000619266 216 ntBASIC0.4□□□□□ -2.35
UPK3BQ9BT76 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.4□□□□□ -2.35
UPK3BQ9BT76 AC005592.1-201ENST00000566527 1640 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.112-201ENST00000363250 102 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU4-20P-201ENST00000365601 151 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-128P-201ENST00000383976 107 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-159P-201ENST00000391080 106 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 CALM2P3-201ENST00000400429 449 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 MTND3P16-201ENST00000452205 344 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU7-187P-201ENST00000458985 68 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-261P-201ENST00000459506 102 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC097462.1-201ENST00000514125 324 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RN7SKP298-201ENST00000515950 94 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-405P-201ENST00000516637 110 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-107P-201ENST00000516643 102 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 RNU6-341P-201ENST00000516973 96 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AP002004.2-201ENST00000531656 154 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC027288.2-201ENST00000553028 243 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC025627.3-201ENST00000582078 182 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AL117336.2-201ENST00000602435 335 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AL096861.1-201ENST00000610899 123 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC073114.1-201ENST00000612027 490 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AL391903.3-201ENST00000612158 163 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
UPK3BQ9BT76 AC009248.2-201ENST00000619826 254 ntBASIC0.39□□□□□ -2.35
UPK3BQ9BT76 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.39□□□□□ -2.35
UPK3BQ9BT76 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.151-201ENST00000363566 112 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.330-201ENST00000365230 109 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 SNORA69-201ENST00000383895 132 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 RPL30P16-201ENST00000419341 429 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.38□□□□□ -2.35
UPK3BQ9BT76 U7.7-201ENST00000459276 60 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 AC083798.1-201ENST00000472671 131 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 AP003484.1-201ENST00000530974 250 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.38□□□□□ -2.35
UPK3BQ9BT76 MTATP6P24-201ENST00000576835 677 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 PIGPP4-201ENST00000584447 307 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 POLR3GP2-201ENST00000588366 668 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 AP001330.5-201ENST00000607176 411 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 FAM157A-202ENST00000615155 405 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 MIR7111-201ENST00000619751 72 ntBASIC0.38□□□□□ -2.35
UPK3BQ9BT76 RNU6-1322P-201ENST00000364309 107 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.481-201ENST00000384373 102 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 MIR613-201ENST00000385248 95 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 RNU4-55P-201ENST00000410731 137 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 MTCO1P20-201ENST00000425366 358 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AC091021.1-201ENST00000468051 388 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AC107401.1-201ENST00000503426 685 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AC093303.1-201ENST00000514549 295 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 SNORD111.1-201ENST00000516421 86 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 Y_RNA.695-201ENST00000516715 107 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AC091144.1-201ENST00000519573 138 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 AC104383.1-201ENST00000530297 370 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 UBL5P4-201ENST00000562584 236 ntBASIC0.37□□□□□ -2.35
UPK3BQ9BT76 ELL2P3-201ENST00000457883 1602 ntBASIC0.36□□□□□ -2.35
UPK3BQ9BT76 SNORA1B-201ENST00000362535 133 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms