Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AP005660.1-201ENST00000522972 293 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.21□□□□□ -2.22
SCN2AQ99250 AL442163.3-201ENST00000554110 156 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 AC005562.2-201ENST00000618264 111 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 AC006001.4-201ENST00000622243 395 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 AL669831.3-213ENST00000636676 183 ntBASIC1.21□□□□□ -2.22
SCN2AQ99250 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.21□□□□□ -2.22
SCN2AQ99250 Y_RNA.224-201ENST00000364308 111 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 SNORD87-201ENST00000364849 89 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 MIR1253-201ENST00000408273 105 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN2AQ99250 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN2AQ99250 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN2AQ99250 AC099799.1-201ENST00000439809 192 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 HSPE1P13-201ENST00000451143 297 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AC022616.4-201ENST00000522985 181 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN2AQ99250 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SCN2AQ99250 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SCN2AQ99250 SNORD114-7-201ENST00000362520 77 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 Y_RNA.112-201ENST00000363250 102 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 Y_RNA.160-201ENST00000363677 92 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SCN2AQ99250 RNU6-370P-201ENST00000411008 104 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN2AQ99250 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 RNU6-875P-201ENST00000516488 106 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 RNU6-58P-201ENST00000517143 103 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN2AQ99250 MIR5690-201ENST00000583739 73 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 AC091178.2-201ENST00000584401 117 ntBASIC1.2□□□□□ -2.22
SCN2AQ99250 RNU6-505P-201ENST00000384427 107 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 Y_RNA.496-201ENST00000384444 101 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR515-2-201ENST00000384883 83 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR515-1-201ENST00000384884 83 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR613-201ENST00000385248 95 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR676-201ENST00000390702 67 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 RNA5SP212-201ENST00000391223 107 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MTCYBP4-201ENST00000401524 249 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 RNU6-1186P-201ENST00000410429 97 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 RNA5SP504-201ENST00000410676 117 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.19□□□□□ -2.22
SCN2AQ99250 AC245047.3-201ENST00000429428 127 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 AC236972.2-201ENST00000434979 310 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 AC004386.2-201ENST00000441858 148 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 RNU6-948P-201ENST00000516374 107 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 AC103810.8-201ENST00000607347 118 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR1244-1-201ENST00000612829 85 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR1244-3-201ENST00000635744 85 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR1244-2-201ENST00000636449 85 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 MIR1244-4-202ENST00000636813 85 ntBASIC1.19□□□□□ -2.22
SCN2AQ99250 SNORA63D-201ENST00000364359 132 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU6-876P-201ENST00000391295 104 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR1185-2-201ENST00000408687 86 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU4-14P-201ENST00000410858 122 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 EBAG9P1-201ENST00000418955 543 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RPS27P22-201ENST00000478056 241 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AL163195.1-201ENST00000496941 348 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AC008834.1-201ENST00000511612 175 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR5695-201ENST00000579717 85 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AL117336.2-201ENST00000602435 335 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AC018630.2-201ENST00000534866 2403 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU6-112P-201ENST00000363599 104 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 Y_RNA.259-201ENST00000364619 101 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 Y_RNA.287-201ENST00000364853 94 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 Y_RNA.428-201ENST00000384078 102 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU6-793P-201ENST00000384233 104 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU6-331P-201ENST00000384724 107 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SCN2AQ99250 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SCN2AQ99250 FCF1P4-201ENST00000448326 183 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN2AQ99250 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN2AQ99250 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN2AQ99250 AC024995.1-201ENST00000523014 93 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AC011604.1-201ENST00000545978 196 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR4438-201ENST00000585271 93 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AC006380.1-201ENST00000603598 186 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AL138825.1-201ENST00000618587 192 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 AL078596.1-201ENST00000624856 447 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
SCN2AQ99250 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN2AQ99250 RNU6-961P-201ENST00000363893 105 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 Y_RNA.387-201ENST00000383918 102 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 MIR520A-201ENST00000384862 85 ntBASIC1.17□□□□□ -2.22
SCN2AQ99250 Y_RNA.646-201ENST00000410980 101 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms