Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AC098592.1-201ENST00000419352 333 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AL353997.1-201ENST00000432936 108 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 SNORD65B-201ENST00000459126 73 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 RNU7-138P-201ENST00000459479 64 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 U8.21-201ENST00000459536 136 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MTND1P22-201ENST00000510572 951 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR548AB-201ENST00000584917 84 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AC012433.1-201ENST00000588916 398 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 SNORA25.18-201ENST00000607153 114 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 AC087683.2-201ENST00000611384 326 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR4315-1-201ENST00000636800 73 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR4315-2-201ENST00000640925 73 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 RNU6-833P-201ENST00000363486 107 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 RNA5SP48-201ENST00000363969 126 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 SNORD14.1-201ENST00000365609 90 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 SNORA40.8-201ENST00000411034 126 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 SSR1P2-201ENST00000415208 787 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 SNORA25.14-201ENST00000516481 132 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 RNU6-341P-201ENST00000516973 96 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 RNU6-430P-201ENST00000517078 107 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC069113.3-201ENST00000521019 150 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 MIR548AO-201ENST00000579992 96 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 FGF7P1-201ENST00000582820 288 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC010620.1-201ENST00000601088 1102 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC120024.3-201ENST00000603167 156 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AC064836.2-201ENST00000609491 462 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 AL109933.3-201ENST00000619095 188 ntBASIC-0.09□□□□□ -2.42
LYSMD1Q96S90 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 RNU6-606P-201ENST00000384721 111 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 RNU6-376P-201ENST00000384731 106 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MIR562-201ENST00000384894 95 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MIR452-201ENST00000385020 85 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 Z98949.2-201ENST00000440996 144 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MTATP6P14-201ENST00000455189 673 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 ELOCP24-201ENST00000456370 334 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC107401.1-201ENST00000503426 685 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MTATP6P9-201ENST00000515039 680 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MTND4P33-201ENST00000556706 766 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 MIR4764-201ENST00000580680 88 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC104695.3-201ENST00000604052 296 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC006566.1-201ENST00000608943 513 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC010999.1-201ENST00000611856 324 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 AC107308.1-201ENST00000615897 301 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 uc_338.11-201ENST00000619132 160 ntBASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
LYSMD1Q96S90 RNA5SP214-201ENST00000363378 118 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 SNORD114-9-201ENST00000364370 72 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 RNU6-108P-201ENST00000365558 107 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 RNU6-456P-201ENST00000384493 107 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 MIR521-1-201ENST00000384902 87 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 MIR122-201ENST00000385044 85 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 RNU2-9P-201ENST00000410194 145 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 MTCO3P19-201ENST00000415864 321 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 AC015818.7-201ENST00000428754 109 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 AC087499.7-201ENST00000441958 109 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 SNORA18.7-201ENST00000516910 131 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 SNORA74.3-201ENST00000517108 154 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 MIR3941-201ENST00000582572 103 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 AC018645.2-201ENST00000609151 472 ntBASIC-0.11□□□□□ -2.43
LYSMD1Q96S90 SNORD68-201ENST00000363214 84 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 RNU6-407P-201ENST00000365280 104 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 MIR1298-201ENST00000408783 112 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 RNA5SP127-201ENST00000411051 133 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AL009048.1-201ENST00000450437 298 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC091885.1-201ENST00000506658 268 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC114811.1-201ENST00000507207 168 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 RNU6-977P-201ENST00000516411 103 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC091178.2-201ENST00000584401 117 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 AL355073.2-201ENST00000612106 557 ntBASIC-0.12□□□□□ -2.43
LYSMD1Q96S90 MTND4P12-201ENST00000498999 1377 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNU6-500P-201ENST00000362349 107 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms