Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MTATP6P14-201ENST00000455189 673 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 RPL23AP75-201ENST00000491601 451 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 RNU6-863P-201ENST00000515989 104 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 AL358944.1-201ENST00000528537 144 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 AC023442.1-201ENST00000531247 422 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.18□□□□□ -2.44
CCDC42Q96M95 AC064836.2-201ENST00000609491 462 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 AC068137.4-201ENST00000638485 296 ntBASIC-0.18□□□□□ -2.44
CCDC42Q96M95 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RNU6-784P-201ENST00000384330 106 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AL049545.1-201ENST00000401856 572 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 MIR1302-7-201ENST00000408841 72 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RNU6-613P-201ENST00000410412 108 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 SNORD83.1-201ENST00000411362 77 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AL008987.1-201ENST00000415528 237 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AC009961.2-201ENST00000435771 251 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RNU7-43P-201ENST00000516554 64 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AC093027.1-201ENST00000546698 429 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RN7SL793P-201ENST00000583259 296 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 MIR4290-201ENST00000583807 95 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 RBM11P1-201ENST00000604951 799 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 AL158050.2-201ENST00000605336 568 ntBASIC-0.19□□□□□ -2.44
CCDC42Q96M95 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC42Q96M95 MIR122-201ENST00000385044 85 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 MIR1298-201ENST00000408783 112 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 RNU6-195P-201ENST00000411352 109 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.2□□□□□ -2.44
CCDC42Q96M95 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 AC107401.1-201ENST00000503426 685 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 SNORA25.14-201ENST00000516481 132 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 AP000240.1-201ENST00000609910 452 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.2□□□□□ -2.44
CCDC42Q96M95 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.21□□□□□ -2.44
CCDC42Q96M95 PIGPP3-201ENST00000425307 415 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.21□□□□□ -2.44
CCDC42Q96M95 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.21□□□□□ -2.44
CCDC42Q96M95 ZNF114P1-201ENST00000453500 292 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 snoU13.18-201ENST00000459483 104 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.21□□□□□ -2.44
CCDC42Q96M95 MIR371B-201ENST00000638082 66 ntBASIC-0.21□□□□□ -2.44
CCDC42Q96M95 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.21□□□□□ -2.44
CCDC42Q96M95 SNORD118-201ENST00000363593 134 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 RNY1P4-201ENST00000384595 115 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 RNU6-679P-201ENST00000391003 106 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AL139396.1-201ENST00000421137 167 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AC005534.2-201ENST00000431047 433 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 MTND1P4-201ENST00000435196 415 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AC112693.2-201ENST00000556538 232 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 MIR8076-201ENST00000611401 83 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 AL355073.2-201ENST00000612106 557 ntBASIC-0.22□□□□□ -2.44
CCDC42Q96M95 MTND4P12-201ENST00000498999 1377 ntBASIC-0.22□□□□□ -2.45
CCDC42Q96M95 RNU6-376P-201ENST00000384731 106 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 MIR136-201ENST00000385207 82 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 RNU6-903P-201ENST00000391270 109 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 RNA5SP95-201ENST00000410319 137 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.23□□□□□ -2.45
CCDC42Q96M95 AC243428.1-201ENST00000421099 264 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 MRPS10P2-201ENST00000431226 381 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 AC114811.1-201ENST00000507207 168 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 SNORA14.1-201ENST00000516113 141 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 MIR5583-1-201ENST00000580941 59 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 AC107308.1-201ENST00000615897 301 ntBASIC-0.23□□□□□ -2.45
CCDC42Q96M95 RNU6-727P-201ENST00000363592 107 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 MIR193B-201ENST00000384907 83 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 MIR15B-201ENST00000385045 98 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 RPS3AP17-201ENST00000472594 777 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 MIR5190-201ENST00000581537 80 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 AC087683.1-201ENST00000591187 441 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 AL022161.1-201ENST00000604390 213 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 AC091925.1-201ENST00000623204 462 ntBASIC-0.24□□□□□ -2.45
CCDC42Q96M95 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 SNORA20B-201ENST00000384220 132 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 MIR516B2-201ENST00000385190 85 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC42Q96M95 AC091179.3-201ENST00000474761 144 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 RNU6-977P-201ENST00000516411 103 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.25□□□□□ -2.45
CCDC42Q96M95 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.25□□□□□ -2.45
CCDC42Q96M95 MIR548AO-201ENST00000579992 96 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.25□□□□□ -2.45
CCDC42Q96M95 AC104408.1-201ENST00000605241 170 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 SNORA25.18-201ENST00000607153 114 ntBASIC-0.25□□□□□ -2.45
CCDC42Q96M95 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms