Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 snoU13.18-201ENST00000459483 104 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 MIR4438-201ENST00000585271 93 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 DISC2.1-201ENST00000612827 205 ntBASIC0.8□□□□□ -2.28
ECHDC3Q96DC8 AP000568.1-201ENST00000282964 442 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU6-1266P-201ENST00000362794 105 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU6-727P-201ENST00000363592 107 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU6-1042P-201ENST00000384204 107 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU6-424P-201ENST00000384367 105 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 MIR517A-201ENST00000385001 87 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 MIR10B-201ENST00000385011 110 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 ZNF885P-201ENST00000420174 1098 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 AL445305.1-201ENST00000432577 575 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RPS26P48-201ENST00000491713 339 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU6-917P-201ENST00000516294 104 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.688-201ENST00000516565 95 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNA5SP168-201ENST00000516642 112 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 ZNF519P2-201ENST00000557032 169 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 MTND3P12-201ENST00000559068 328 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 MIR3672-201ENST00000584290 82 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 AL162413.1-201ENST00000603198 110 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 AC080078.2-201ENST00000603766 501 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 SNORA28-201ENST00000606769 126 ntBASIC0.79□□□□□ -2.28
ECHDC3Q96DC8 RNU5F-3P-201ENST00000363767 117 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 Y_RNA.530-201ENST00000384587 101 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 RNU6-780P-201ENST00000391030 104 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 AF228730.1-201ENST00000397972 663 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 STAG3L5P-204ENST00000443759 179 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 OR9P1P-201ENST00000496431 281 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 AC091144.1-201ENST00000519573 138 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 AL590705.4-201ENST00000532209 134 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 MIR6079-201ENST00000635807 62 ntBASIC0.78□□□□□ -2.28
ECHDC3Q96DC8 RNU6-451P-201ENST00000362921 107 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.179-201ENST00000363844 90 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU6-596P-201ENST00000365395 98 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.373-201ENST00000365600 103 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU6-483P-201ENST00000384088 108 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 MTCO3P19-201ENST00000415864 321 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 CALM2P4-201ENST00000430810 426 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC107401.1-201ENST00000503426 685 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC097462.1-201ENST00000514125 324 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 ACA59.1-201ENST00000515966 143 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU6-1281P-201ENST00000516223 105 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU6-256P-201ENST00000516747 97 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 APOOP3-201ENST00000536787 586 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC091178.2-201ENST00000584401 117 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC124303.1-201ENST00000605703 360 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 AC092954.2-201ENST00000609103 430 ntBASIC0.77□□□□□ -2.29
ECHDC3Q96DC8 RNU6-1252P-201ENST00000363054 104 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.124-201ENST00000363339 93 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 SNORA2.2-201ENST00000365473 135 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 RNU6-969P-201ENST00000383900 105 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 RNU6-541P-201ENST00000384709 110 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 U8.16-201ENST00000391279 133 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 RPL30P16-201ENST00000419341 429 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 RPS4XP11-201ENST00000446897 772 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AP000870.1-201ENST00000472927 406 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AC010469.2-201ENST00000496412 480 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AC134698.4-201ENST00000523451 826 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 AC023157.2-201ENST00000540596 141 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.76□□□□□ -2.29
ECHDC3Q96DC8 RNY3P3-201ENST00000363816 102 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.184-201ENST00000363884 108 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 Y_RNA.212-201ENST00000364177 102 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 RNY1P14-201ENST00000384426 108 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 MIR200A-201ENST00000384875 90 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 MIR548J-201ENST00000408833 112 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 RPS27P22-201ENST00000478056 241 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AC022493.2-201ENST00000506122 481 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 RNU7-28P-201ENST00000516759 62 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AL121579.1-201ENST00000555129 305 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 NBR2-204ENST00000587322 63 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
ECHDC3Q96DC8 PRELID3BP2-201ENST00000605362 201 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms