Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 Y_RNA.100-201ENST00000363141 102 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 RNU6-128P-201ENST00000383976 107 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 SNORA75.2-201ENST00000391138 150 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 SNORA75.3-201ENST00000391231 150 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 CALM2P3-201ENST00000400429 449 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 MTCO3P19-201ENST00000415864 321 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 MTND4P18-201ENST00000447010 465 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC093850.1-201ENST00000454121 251 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC091179.3-201ENST00000474761 144 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 OR9P1P-201ENST00000496431 281 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC010598.1-201ENST00000510378 103 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC097462.1-201ENST00000514125 324 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 RN7SKP298-201ENST00000515950 94 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC027419.1-201ENST00000522976 328 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 AC004832.4-201ENST00000608952 331 ntBASIC0.47□□□□□ -2.33
ZIC4Q8N9L1 SNORD113-7-201ENST00000363762 77 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 Y_RNA.179-201ENST00000363844 90 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 RNA5SP482-201ENST00000391269 118 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC104332.1-201ENST00000440471 797 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 snoU13.25-201ENST00000458945 104 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC083798.1-201ENST00000472671 131 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 SNORD111.1-201ENST00000516421 86 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 RNU7-172P-201ENST00000517125 64 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AP002004.2-201ENST00000531656 154 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC027288.2-201ENST00000553028 243 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 PIGPP4-201ENST00000584447 307 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AP001330.5-201ENST00000607176 411 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 AC073114.1-201ENST00000612027 490 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.46□□□□□ -2.34
ZIC4Q8N9L1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNU1-133P-201ENST00000364867 167 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MIR514A2-201ENST00000385131 88 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MIR514A3-201ENST00000385132 88 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MIR613-201ENST00000385248 95 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNU6-159P-201ENST00000391080 106 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNU4-55P-201ENST00000410731 137 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 Z82188.1-201ENST00000436709 154 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MTND4LP16-201ENST00000440828 295 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 PCMTD1P1-201ENST00000455560 355 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MTCO2P30-201ENST00000503662 364 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 Y_RNA.695-201ENST00000516715 107 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNU6-341P-201ENST00000516973 96 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 MIR4760-201ENST00000585040 80 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 7SK.7-201ENST00000603504 247 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 AL391903.3-201ENST00000612158 163 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 AL158209.2-201ENST00000619266 216 ntBASIC0.45□□□□□ -2.34
ZIC4Q8N9L1 RNU6-1322P-201ENST00000364309 107 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 RNU6-522P-201ENST00000364497 107 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 Y_RNA.267-201ENST00000364679 109 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 SNORA69-201ENST00000383895 132 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 Y_RNA.481-201ENST00000384373 102 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AL035398.1-201ENST00000430869 322 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 DAP3P1-201ENST00000441522 278 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 MTND3P16-201ENST00000452205 344 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 RNU7-187P-201ENST00000458985 68 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AC113410.1-201ENST00000505029 247 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AC093303.1-201ENST00000514549 295 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AC022868.1-201ENST00000517767 391 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 POLR3GP2-201ENST00000588366 668 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 AL096861.1-201ENST00000610899 123 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.44□□□□□ -2.34
ZIC4Q8N9L1 ELL2P3-201ENST00000457883 1602 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 RNU6-956P-201ENST00000458868 103 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 RNU6-405P-201ENST00000516637 110 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 RNU6-107P-201ENST00000516643 102 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 AC104383.1-201ENST00000530297 370 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 LRRC34P1-201ENST00000542742 915 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 MIR3684-201ENST00000579779 74 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 AL117336.2-201ENST00000602435 335 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 AC009248.2-201ENST00000619826 254 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
ZIC4Q8N9L1 AC005592.1-201ENST00000566527 1640 ntBASIC0.42□□□□□ -2.34
ZIC4Q8N9L1 MIRLET7C-201ENST00000362160 84 ntBASIC0.42□□□□□ -2.34
ZIC4Q8N9L1 SNORA1B-201ENST00000362535 133 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms