Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-187P-201ENST00000384139 106 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MTND3P20-201ENST00000407663 186 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MTCO3P42-201ENST00000509488 518 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MTCO3P39-201ENST00000514812 518 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AP002004.2-201ENST00000531656 154 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AC090897.1-201ENST00000580909 226 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MIR4676-201ENST00000583078 72 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AC097478.2-201ENST00000610572 514 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 U4.2-201ENST00000618561 85 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 U6.73-201ENST00000619194 103 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MIR655-201ENST00000362159 97 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 ELOCP17-201ENST00000414751 326 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AL133396.1-201ENST00000432048 687 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AC007327.1-201ENST00000447461 264 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AC013470.1-201ENST00000453438 462 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AC007215.1-201ENST00000464893 276 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 MIR4441-201ENST00000582623 100 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 AL445435.1-201ENST00000604232 665 ntBASIC-1.32□□□□□ -2.62
VPS8Q8N3P4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 SNORA72.1-201ENST00000363485 129 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 SNORD114-25-201ENST00000363742 72 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 RNU6-811P-201ENST00000384069 107 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 MIR578-201ENST00000384828 96 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 MIR873-201ENST00000401120 77 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 AP000542.1-201ENST00000448473 371 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 SNORA74.3-201ENST00000517108 154 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 RNU7-128P-201ENST00000517247 62 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 AC133485.4-201ENST00000561835 220 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 snoZ196.1-201ENST00000625269 89 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 AC005592.1-201ENST00000566527 1640 ntBASIC-1.33□□□□□ -2.62
VPS8Q8N3P4 AC106754.1-201ENST00000562632 1513 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 SNORA26-201ENST00000391286 122 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 MIR320C1-201ENST00000408566 88 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AL355994.1-201ENST00000424379 260 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 RNA5SP169-201ENST00000517268 117 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AC109479.2-201ENST00000517842 174 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 AC245008.1-201ENST00000608123 476 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.34□□□□□ -2.62
VPS8Q8N3P4 RNU6-396P-201ENST00000365369 105 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 SNORD14.1-201ENST00000365609 90 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNA5SP482-201ENST00000391269 118 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNU2-62P-201ENST00000410868 191 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 TIMM9P2-201ENST00000419324 266 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 MTND1P4-201ENST00000435196 415 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 SEPT14P24-201ENST00000447236 180 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 MTCO3P27-201ENST00000514397 196 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 MIR4306-201ENST00000583390 91 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 MIR548AD-201ENST00000584780 82 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 AL450270.1-201ENST00000606160 391 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 MIR6514-201ENST00000622549 70 ntBASIC-1.35□□□□□ -2.63
VPS8Q8N3P4 RNU6-960P-201ENST00000364056 120 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 AC098592.1-201ENST00000419352 333 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 AC012306.1-201ENST00000423267 114 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 PCNPP5-201ENST00000452246 481 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 MIR7844-201ENST00000616161 122 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 AC005562.2-201ENST00000618264 111 ntBASIC-1.36□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 USP9YP11-201ENST00000427537 717 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC015818.7-201ENST00000428754 109 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC004386.2-201ENST00000441858 148 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC087499.7-201ENST00000441958 109 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC104383.1-201ENST00000530297 370 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC087894.1-201ENST00000538359 518 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 ADI1P3-201ENST00000549509 470 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC103996.1-201ENST00000555468 102 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AC099785.1-201ENST00000605697 437 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 AL442067.1-201ENST00000613261 223 ntBASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.37□□□□□ -2.63
VPS8Q8N3P4 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 MIR452-201ENST00000385020 85 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-447P-201ENST00000410293 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-355P-201ENST00000410427 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-791P-201ENST00000410467 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-705P-201ENST00000410601 104 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms