Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.28□□□□□ -2.45
USP54Q70EL1 ZNF204P-201ENST00000416749 2397 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 RNU6-396P-201ENST00000365369 105 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 RNU6-809P-201ENST00000384461 107 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.29□□□□□ -2.46
USP54Q70EL1 snoU13.6-201ENST00000458785 104 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 RNU7-182P-201ENST00000459009 62 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AC090572.1-201ENST00000519251 160 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AP002004.2-201ENST00000531656 154 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AC096720.1-201ENST00000604441 183 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AC007684.1-201ENST00000609671 477 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AC090517.2-201ENST00000614966 680 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 AC013437.2-201ENST00000639587 677 ntBASIC-0.29□□□□□ -2.46
USP54Q70EL1 RNU6-227P-201ENST00000362865 103 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU6-715P-201ENST00000365204 103 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 MIR1298-201ENST00000408783 112 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.3□□□□□ -2.46
USP54Q70EL1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.3□□□□□ -2.46
USP54Q70EL1 AL353997.1-201ENST00000432936 108 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.3□□□□□ -2.46
USP54Q70EL1 PCNPP5-201ENST00000452246 481 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 MTCO2P6-201ENST00000463134 685 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU7-41P-201ENST00000515917 61 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNA5SP268-201ENST00000516828 124 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU6-430P-201ENST00000517078 107 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AC022878.1-201ENST00000530684 149 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 BNIP3P39-201ENST00000601077 554 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU4-5P-201ENST00000607255 135 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 SNORA20.2-201ENST00000383922 131 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU6-30P-201ENST00000384561 107 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.3□□□□□ -2.46
USP54Q70EL1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 SNORA74.3-201ENST00000517108 154 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AC105185.1-201ENST00000518705 535 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AL133173.2-201ENST00000614270 90 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 AC022418.1-201ENST00000624118 445 ntBASIC-0.3□□□□□ -2.46
USP54Q70EL1 SNORA1B-201ENST00000362535 133 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 MIR892B-201ENST00000401279 77 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 RNU6-757P-201ENST00000410334 100 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 RNU2-72P-201ENST00000411175 163 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.31□□□□□ -2.46
USP54Q70EL1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.31□□□□□ -2.46
USP54Q70EL1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.31□□□□□ -2.46
USP54Q70EL1 SCARNA18-201ENST00000459004 134 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 RN7SKP164-201ENST00000516138 266 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 MTND1P35-201ENST00000526739 508 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 AC023157.2-201ENST00000540596 141 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 MIR4775-201ENST00000581168 75 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 AC068790.2-201ENST00000602601 557 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 SNORD11B-201ENST00000607707 90 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 AL049777.1-201ENST00000622740 518 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 SEPT14P19-203ENST00000633205 211 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 MTND4P9-201ENST00000507819 1346 ntBASIC-0.31□□□□□ -2.46
USP54Q70EL1 MIR145-201ENST00000384967 88 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 SNORD83.1-201ENST00000411362 77 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 ZNF885P-201ENST00000420174 1098 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 RPS29P27-201ENST00000463711 170 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.32□□□□□ -2.46
USP54Q70EL1 SNORA25.14-201ENST00000516481 132 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.32□□□□□ -2.46
USP54Q70EL1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.32□□□□□ -2.46
USP54Q70EL1 MIR4804-201ENST00000581683 73 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 MIR4743-201ENST00000584576 69 ntBASIC-0.32□□□□□ -2.46
USP54Q70EL1 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-580P-201ENST00000365159 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-169P-201ENST00000365336 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 MIR593-201ENST00000384856 100 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AC097462.1-201ENST00000514125 324 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.33□□□□□ -2.46
USP54Q70EL1 MIR548AX-201ENST00000580117 73 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AC087683.1-201ENST00000591187 441 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AL121992.2-201ENST00000606262 256 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AC068137.4-201ENST00000638485 296 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-654P-201ENST00000364373 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-541P-201ENST00000384709 110 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 MIR1-2-201ENST00000384961 85 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.33□□□□□ -2.46
USP54Q70EL1 AL590632.1-201ENST00000424289 371 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 PIGPP3-201ENST00000425307 415 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 AC091021.1-201ENST00000468051 388 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RPL23AP75-201ENST00000491601 451 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-848P-201ENST00000515948 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-617P-201ENST00000516147 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-473P-201ENST00000516164 107 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.33□□□□□ -2.46
USP54Q70EL1 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms