Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC079354.2-201ENST00000453523 154 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 RNU7-57P-201ENST00000459540 60 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 SNORA74.3-201ENST00000517108 154 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 RPL21P9-201ENST00000556149 474 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 AC090617.3-201ENST00000573670 475 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 RNU1-29P-201ENST00000606574 126 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 U6.73-201ENST00000619194 103 ntBASIC-1.02□□□□□ -2.57
UBR3Q6ZT12 RNA5SP48-201ENST00000363969 126 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 SNORA25.7-201ENST00000364375 127 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 RNU6-811P-201ENST00000384069 107 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 SNORA67.2-201ENST00000384300 149 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 MLLT10P1-201ENST00000418346 262 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC013470.1-201ENST00000453438 462 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 RNU6-583P-201ENST00000516012 92 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AL008636.1-201ENST00000625038 1018 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 RNU4-16P-201ENST00000364737 141 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 RNA5SP482-201ENST00000391269 118 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 MIR548L-201ENST00000408303 86 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC092809.3-201ENST00000415453 231 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC090960.1-201ENST00000421072 306 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC015818.7-201ENST00000428754 109 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC087499.7-201ENST00000441958 109 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC026414.1-201ENST00000504046 698 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 DEFB131E-202ENST00000602581 683 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC100814.1-201ENST00000606963 623 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC068792.1-201ENST00000621354 417 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 AC027279.3-201ENST00000625055 122 ntBASIC-1.03□□□□□ -2.57
UBR3Q6ZT12 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 SNORA3B-201ENST00000391305 131 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 RNU6-221P-201ENST00000459541 99 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 snoZ196.1-201ENST00000625269 89 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 AC099654.8-201ENST00000637757 681 ntBASIC-1.04□□□□□ -2.58
UBR3Q6ZT12 AC005592.1-201ENST00000566527 1640 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AC010975.2-201ENST00000427781 588 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AC091951.3-201ENST00000504093 246 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AL355375.2-201ENST00000574825 175 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AL442067.1-201ENST00000613261 223 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AC138649.3-201ENST00000622154 254 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 MIR6514-201ENST00000622549 70 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 SNORD38B-202ENST00000625943 69 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 RNU7-28P-201ENST00000516759 62 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AC025647.1-201ENST00000517879 253 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 AL136221.1-201ENST00000621449 509 ntBASIC-1.05□□□□□ -2.58
UBR3Q6ZT12 RNU6-549P-201ENST00000384433 107 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 RPL23AP30-201ENST00000432419 501 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 AL049829.1-201ENST00000465411 156 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 MIR4789-201ENST00000577469 82 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 AC125232.2-201ENST00000592457 143 ntBASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.06□□□□□ -2.58
UBR3Q6ZT12 SNORD115-48-201ENST00000364764 76 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AL133396.1-201ENST00000432048 687 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 POLR2KP2-201ENST00000438155 177 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 RNA5SP180-201ENST00000516181 101 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AC021451.1-201ENST00000523498 1129 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AC087894.1-201ENST00000538359 518 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 SNORD92-201ENST00000585078 85 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AC020891.4-201ENST00000605745 93 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AL590491.3-201ENST00000610731 82 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 MIR7844-201ENST00000616161 122 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 RNU6-481P-201ENST00000384194 107 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 MIR125B2-201ENST00000385128 89 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 MIR136-201ENST00000385207 82 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AC104563.1-201ENST00000476147 376 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 AL139286.2-201ENST00000606838 396 ntBASIC-1.07□□□□□ -2.58
UBR3Q6ZT12 ZNF204P-201ENST00000416749 2397 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 SNORD115-2-201ENST00000362842 82 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 SNORA75.1-201ENST00000391130 148 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 AL355143.1-201ENST00000407101 841 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 AC244250.2-201ENST00000418731 148 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 PIGPP3-201ENST00000425307 415 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 AC079781.2-201ENST00000446424 169 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 AC079395.1-201ENST00000510981 262 ntBASIC-1.08□□□□□ -2.58
UBR3Q6ZT12 RNU6-469P-201ENST00000516253 101 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms