Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 DEFB130D-201ENST00000426866 237 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 RNU6-504P-201ENST00000516568 104 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 MIR5708-201ENST00000579723 85 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 AC008250.2-201ENST00000615261 205 ntBASIC-0.47□□□□□ -2.48
CSPG4Q6UVK1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.49
CSPG4Q6UVK1 ZNF204P-201ENST00000416749 2397 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 SNORD115-48-201ENST00000364764 76 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC093303.1-201ENST00000514549 295 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 SNORA31.10-201ENST00000516482 106 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 RNA5SP454-201ENST00000517231 127 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 ADI1P3-201ENST00000549509 470 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 MIR5706-201ENST00000579841 80 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC246785.4-201ENST00000605374 287 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC124016.2-201ENST00000610058 665 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC006441.5-201ENST00000612680 209 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AL139418.1-201ENST00000613613 177 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 MIR499B-201ENST00000636498 73 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 MTND5P33-201ENST00000571250 1450 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 SNORA1B-201ENST00000362535 133 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 MIR578-201ENST00000384828 96 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 RNU7-182P-201ENST00000459009 62 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AF186996.7-201ENST00000492781 209 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC097462.1-201ENST00000514125 324 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 RNU6-377P-201ENST00000515965 102 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC234772.3-201ENST00000602277 528 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 RBM11P1-201ENST00000604951 799 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 AC068792.1-201ENST00000621354 417 ntBASIC-0.48□□□□□ -2.49
CSPG4Q6UVK1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU6-580P-201ENST00000365159 107 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 MIR19A-201ENST00000384878 82 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RPS3AP3-201ENST00000411933 242 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 USP9YP29-201ENST00000445112 563 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU1-117P-201ENST00000517041 158 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AP002004.2-201ENST00000531656 154 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 MIR4677-201ENST00000584153 80 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 uc_338.28-201ENST00000612082 187 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC027279.3-201ENST00000625055 122 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU6-777P-201ENST00000364265 104 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU6-25P-201ENST00000383873 107 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU6-29P-201ENST00000384637 107 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 SNORD83B-201ENST00000386745 93 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 MTCO2P33-201ENST00000402100 465 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 SNORD83.1-201ENST00000411362 77 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC090960.1-201ENST00000421072 306 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 PIGPP3-201ENST00000425307 415 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AL133396.1-201ENST00000432048 687 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AP000542.1-201ENST00000448473 371 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC013470.1-201ENST00000453438 462 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 MTCO3P27-201ENST00000514397 196 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC022616.3-201ENST00000523940 148 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC023442.1-201ENST00000531247 422 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AL355375.2-201ENST00000574825 175 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AL670379.3-201ENST00000605040 251 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AP002360.4-201ENST00000606980 481 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC092574.1-201ENST00000609771 420 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC112204.3-201ENST00000623822 332 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 AC010608.3-201ENST00000625048 527 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 MIR4251-201ENST00000635819 61 ntBASIC-0.49□□□□□ -2.49
CSPG4Q6UVK1 RNU2-39P-201ENST00000410604 198 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AC010486.3-201ENST00000511602 785 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU6-583P-201ENST00000516012 92 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU7-99P-201ENST00000516271 62 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 MIR4438-201ENST00000585271 93 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AC026741.1-201ENST00000605892 482 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU6-88P-201ENST00000606801 100 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 AC132825.7-201ENST00000638744 335 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU6-137P-201ENST00000363680 108 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 MIR1185-2-201ENST00000408687 86 ntBASIC-0.5□□□□□ -2.49
CSPG4Q6UVK1 RNU2-8P-201ENST00000410727 190 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms