Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR760-201ENST00000390220 80 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AL136310.1-201ENST00000404926 654 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AL355143.1-201ENST00000407101 841 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 RNU7-182P-201ENST00000459009 62 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AC097462.1-201ENST00000514125 324 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 HIF1AP1-201ENST00000553642 175 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AC090897.1-201ENST00000580909 226 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 MIR4802-201ENST00000581881 80 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AP001180.6-201ENST00000584918 159 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 AC139792.3-201ENST00000623525 224 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 MIR4251-201ENST00000635819 61 ntBASIC-0.69□□□□□ -2.52
HIST1H1AQ02539 SNORD115-7-201ENST00000365306 82 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 SNORD14C-201ENST00000365382 88 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 MIR136-201ENST00000385207 82 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AL049545.1-201ENST00000401856 572 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 BTBD7P2-201ENST00000441962 620 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 SNORD126-201ENST00000459475 77 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC091951.3-201ENST00000504093 246 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC114811.1-201ENST00000507207 168 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC005178.1-201ENST00000508392 440 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC091133.4-201ENST00000511142 308 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 RNU6-63P-201ENST00000516690 95 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 RNU6-782P-201ENST00000516852 104 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AL358944.1-201ENST00000528537 144 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AL670379.3-201ENST00000605040 251 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC020891.4-201ENST00000605745 93 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 MIR548AZ-201ENST00000616567 95 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 AC138649.3-201ENST00000622154 254 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 SCARNA4-201ENST00000629045 128 ntBASIC-0.7□□□□□ -2.52
HIST1H1AQ02539 RNU6-396P-201ENST00000365369 105 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 AC243428.1-201ENST00000421099 264 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 MTND4LP11-201ENST00000422184 280 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 AC079354.2-201ENST00000453523 154 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 MTCO2P6-201ENST00000463134 685 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 AC010587.1-201ENST00000505809 469 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 RNU7-172P-201ENST00000517125 64 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 AC006157.1-201ENST00000611750 366 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 AC022418.1-201ENST00000624118 445 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 MTND4P4-201ENST00000439033 1366 ntBASIC-0.71□□□□□ -2.52
HIST1H1AQ02539 MIR329-1-201ENST00000385028 80 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 MT-TN-201ENST00000387400 73 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 RNU6-550P-201ENST00000391057 101 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 SNORD115.1-201ENST00000391109 76 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 SNORD65B-201ENST00000459126 73 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AC116562.3-201ENST00000506136 177 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 SNORA25.17-201ENST00000517184 124 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AC068587.5-201ENST00000528506 175 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AC133485.4-201ENST00000561835 220 ntBASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.72□□□□□ -2.52
HIST1H1AQ02539 SNORA72.1-201ENST00000363485 129 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 ELOCP4-201ENST00000420090 333 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 SUMO1P2-201ENST00000452524 304 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 MIR499B-201ENST00000636498 73 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 AL163152.1-201ENST00000642001 374 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 MTND4P9-201ENST00000507819 1346 ntBASIC-0.73□□□□□ -2.53
HIST1H1AQ02539 SNORD45.3-201ENST00000363836 72 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 RNU6-187P-201ENST00000384139 106 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 MIR938-201ENST00000401216 83 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 AC112204.1-201ENST00000502591 103 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 AC026371.1-201ENST00000551867 419 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 AL355375.2-201ENST00000574825 175 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 AC008608.1-201ENST00000603910 127 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
HIST1H1AQ02539 MTND5P17-201ENST00000418405 1603 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MIR101-1-201ENST00000362265 75 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 RNA5SP117-201ENST00000365294 118 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 RNU6-245P-201ENST00000384020 107 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MIR196A2-201ENST00000385189 110 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MLLT10P1-201ENST00000418346 262 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MTND1P26-201ENST00000440488 538 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MTND1P17-201ENST00000448961 204 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 SNORD123-201ENST00000459473 70 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 MIR5589-201ENST00000579442 60 ntBASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.75□□□□□ -2.53
HIST1H1AQ02539 SNORD87-201ENST00000364849 89 ntBASIC-0.76□□□□□ -2.53
HIST1H1AQ02539 AC117470.1-201ENST00000381974 330 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms