Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 SNORA20B-201ENST00000384220 132 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 SNORA8.2-201ENST00000384372 139 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 RNU6-136P-201ENST00000384663 107 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
VBP1P61758 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.24□□□□□ -2.45
VBP1P61758 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.24□□□□□ -2.45
VBP1P61758 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.24□□□□□ -2.45
VBP1P61758 AC091144.1-201ENST00000519573 138 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 MIR4804-201ENST00000581683 73 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 AC006435.5-201ENST00000624486 112 ntBASIC-0.24□□□□□ -2.45
VBP1P61758 SNORD68-201ENST00000363214 84 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 RNU6-245P-201ENST00000384020 107 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 RNU6-906P-201ENST00000384700 70 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 RNU6-376P-201ENST00000384731 106 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 MIR562-201ENST00000384894 95 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 MIR136-201ENST00000385207 82 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.25□□□□□ -2.45
VBP1P61758 ZNF114P1-201ENST00000453500 292 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 RNU7-56P-201ENST00000458744 62 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 AC091179.3-201ENST00000474761 144 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 AP003072.2-201ENST00000527756 676 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 MTND4P33-201ENST00000556706 766 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.25□□□□□ -2.45
VBP1P61758 MIR4298-201ENST00000584380 73 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 MIR548AB-201ENST00000584917 84 ntBASIC-0.25□□□□□ -2.45
VBP1P61758 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.25□□□□□ -2.45
VBP1P61758 MTND4P9-201ENST00000507819 1346 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 RNU6-500P-201ENST00000362349 107 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 RNU6-873P-201ENST00000363833 107 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 RNU6-934P-201ENST00000365154 107 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 RNU6-108P-201ENST00000365558 107 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
VBP1P61758 PCNPP3-201ENST00000393579 471 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC243428.1-201ENST00000421099 264 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AL590632.1-201ENST00000424289 371 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.26□□□□□ -2.45
VBP1P61758 Z82188.1-201ENST00000436709 154 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 snoU109.3-201ENST00000459477 145 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.26□□□□□ -2.45
VBP1P61758 AC018710.1-201ENST00000506509 158 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC091885.1-201ENST00000506658 268 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 RNA5SP54-201ENST00000516951 92 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC016957.1-201ENST00000534895 309 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.26□□□□□ -2.45
VBP1P61758 MTND1P8-201ENST00000571424 950 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 MIR3678-201ENST00000578455 94 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.26□□□□□ -2.45
VBP1P61758 AC087683.1-201ENST00000591187 441 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC020891.4-201ENST00000605745 93 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 MIR98-201ENST00000606724 119 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 U2.17-201ENST00000611454 95 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 uc_338.11-201ENST00000619132 160 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 AC098679.4-201ENST00000624241 654 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 MIR4251-201ENST00000635819 61 ntBASIC-0.26□□□□□ -2.45
VBP1P61758 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
VBP1P61758 SNORD45.3-201ENST00000363836 72 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 RNU6-407P-201ENST00000365280 104 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AL008987.1-201ENST00000415528 237 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AC018865.2-201ENST00000423631 129 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.27□□□□□ -2.45
VBP1P61758 SNORD123-201ENST00000459473 70 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 U8.21-201ENST00000459536 136 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VBP1P61758 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.27□□□□□ -2.45
VBP1P61758 RNA5SP20-201ENST00000515976 84 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 RNU7-43P-201ENST00000516554 64 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AL137161.1-201ENST00000532231 390 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.27□□□□□ -2.45
VBP1P61758 SCOCP1-201ENST00000554676 349 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 MIR4771-2-201ENST00000577758 74 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 MIR4771-1-201ENST00000582617 74 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 AC087683.2-201ENST00000611384 326 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 MIR6734-201ENST00000621166 68 ntBASIC-0.27□□□□□ -2.45
VBP1P61758 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.27□□□□□ -2.45
VBP1P61758 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 RNU6-302P-201ENST00000365249 107 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 RNU6-282P-201ENST00000365357 103 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MIR593-201ENST00000384856 100 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MIR521-1-201ENST00000384902 87 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MIR145-201ENST00000384967 88 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MIR643-201ENST00000385267 97 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 RNU6-903P-201ENST00000391270 109 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 AL049545.1-201ENST00000401856 572 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MTND1P4-201ENST00000435196 415 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 AC009961.2-201ENST00000435771 251 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 MTND4P32-201ENST00000437189 1237 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 SNRPGP9-201ENST00000456025 225 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 snoU13.18-201ENST00000459483 104 ntBASIC-0.28□□□□□ -2.45
VBP1P61758 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.28□□□□□ -2.45
VBP1P61758 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.28□□□□□ -2.45
VBP1P61758 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms