Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 HMGN1P12-201ENST00000499125 195 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RNU4-49P-201ENST00000516080 140 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RNU6-902P-201ENST00000517212 91 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.99□□□□□ -2.25
CXCL12P48061 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL12P48061 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.99□□□□□ -2.25
CXCL12P48061 AC015688.6-201ENST00000577737 104 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 U6.108-201ENST00000637764 58 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CXCL12P48061 RNU6-137P-201ENST00000363680 108 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 RNU6-596P-201ENST00000365395 98 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 RNU6-1013P-201ENST00000384180 107 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 MIR10B-201ENST00000385011 110 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 MIR1185-2-201ENST00000408687 86 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC008134.1-201ENST00000420943 193 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AL135790.2-201ENST00000437701 267 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC027119.1-201ENST00000440877 241 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.98□□□□□ -2.25
CXCL12P48061 AC099513.1-201ENST00000490423 301 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC079140.2-201ENST00000506193 142 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
CXCL12P48061 RNU7-175P-201ENST00000515915 61 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 RNU1-54P-201ENST00000517181 120 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AL590705.4-201ENST00000532209 134 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AL442163.3-201ENST00000554110 156 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 FRG2DP-202ENST00000566967 323 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 MIR4709-201ENST00000577272 72 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 MZT1P2-201ENST00000604387 248 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC093913.1-201ENST00000614178 329 ntBASIC0.98□□□□□ -2.25
CXCL12P48061 AC091812.1-201ENST00000432235 1948 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 ZNF299P-201ENST00000406845 1804 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 RNU6-222P-201ENST00000362438 107 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 U3.8-201ENST00000363675 217 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 RNU6-595P-201ENST00000363944 107 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 RNU6-793P-201ENST00000384233 104 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 Y_RNA.473-201ENST00000384333 102 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AC010154.1-201ENST00000425857 269 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.97□□□□□ -2.25
CXCL12P48061 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.97□□□□□ -2.25
CXCL12P48061 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.97□□□□□ -2.25
CXCL12P48061 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
CXCL12P48061 RNU7-34P-201ENST00000459394 64 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AC011352.1-201ENST00000512300 793 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 Y_RNA.682-201ENST00000516457 100 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 RNU1-142P-201ENST00000516682 145 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AC134698.4-201ENST00000523451 826 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 CBX3P8-201ENST00000532412 525 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.97□□□□□ -2.25
CXCL12P48061 MIR4790-201ENST00000577799 79 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.97□□□□□ -2.25
CXCL12P48061 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AL929325.1-201ENST00000603096 117 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 7SK.7-201ENST00000603504 247 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.97□□□□□ -2.25
CXCL12P48061 Y_RNA.179-201ENST00000363844 90 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 RNU6-280P-201ENST00000364145 104 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.96□□□□□ -2.26
CXCL12P48061 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CXCL12P48061 AL356776.1-201ENST00000406574 447 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 RNU6-1186P-201ENST00000410429 97 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 MTND3P23-201ENST00000431980 347 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 NDUFB4P10-201ENST00000452541 359 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 MTND5P5-201ENST00000503764 376 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 Y_RNA.655-201ENST00000515919 96 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AC091144.1-201ENST00000519573 138 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AC024995.1-201ENST00000523014 93 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 MIR3937-201ENST00000580135 106 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AC018638.8-201ENST00000588755 281 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AC022217.4-201ENST00000604389 163 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
CXCL12P48061 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
CXCL12P48061 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CXCL12P48061 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
CXCL12P48061 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.95□□□□□ -2.26
CXCL12P48061 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CXCL12P48061 Y_RNA.86-201ENST00000363020 111 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 AC005534.2-201ENST00000431047 433 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 SNORD5.1-201ENST00000458800 75 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 RNU6-329P-201ENST00000459618 107 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 RPS26P45-201ENST00000471748 340 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.95□□□□□ -2.26
CXCL12P48061 AC093303.1-201ENST00000514549 295 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 RNU7-128P-201ENST00000517247 62 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.95□□□□□ -2.26
CXCL12P48061 AL365434.2-201ENST00000607979 234 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 AC010999.1-201ENST00000611856 324 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 AL078604.3-201ENST00000615580 211 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 AC073869.6-201ENST00000640656 341 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CXCL12P48061 AC018630.2-201ENST00000534866 2403 ntBASIC0.95□□□□□ -2.26
CXCL12P48061 Y_RNA.106-201ENST00000363189 100 ntBASIC0.94□□□□□ -2.26
CXCL12P48061 RNU6-281P-201ENST00000384212 103 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms