Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
CD28P10747 MIR3942-201ENST00000585264 109 ntBASIC0.79□□□□□ -2.28
CD28P10747 AL513534.2-201ENST00000603836 250 ntBASIC0.79□□□□□ -2.28
CD28P10747 AF250324.2-201ENST00000608299 610 ntBASIC0.79□□□□□ -2.28
CD28P10747 AC099654.5-201ENST00000636479 350 ntBASIC0.79□□□□□ -2.28
CD28P10747 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CD28P10747 AC018630.2-201ENST00000534866 2403 ntBASIC0.78□□□□□ -2.28
CD28P10747 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
CD28P10747 ZNF299P-201ENST00000406845 1804 ntBASIC0.78□□□□□ -2.28
CD28P10747 RNU6-1266P-201ENST00000362794 105 ntBASIC0.78□□□□□ -2.28
CD28P10747 Y_RNA.179-201ENST00000363844 90 ntBASIC0.78□□□□□ -2.28
CD28P10747 RNU6-1090P-201ENST00000364065 94 ntBASIC0.78□□□□□ -2.28
CD28P10747 RNY1-201ENST00000364228 113 ntBASIC0.78□□□□□ -2.28
CD28P10747 Y_RNA.402-201ENST00000383972 102 ntBASIC0.78□□□□□ -2.28
CD28P10747 SNORA25-201ENST00000384384 134 ntBASIC0.78□□□□□ -2.28
CD28P10747 MIR660-201ENST00000385235 97 ntBASIC0.78□□□□□ -2.28
CD28P10747 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CD28P10747 MTND1P17-201ENST00000448961 204 ntBASIC0.78□□□□□ -2.28
CD28P10747 AP000870.1-201ENST00000472927 406 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC092991.1-201ENST00000477176 376 ntBASIC0.78□□□□□ -2.28
CD28P10747 RPS29P25-201ENST00000481709 171 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC103851.1-201ENST00000506833 274 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
CD28P10747 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.78□□□□□ -2.28
CD28P10747 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.78□□□□□ -2.28
CD28P10747 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.78□□□□□ -2.28
CD28P10747 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC103591.3-201ENST00000608684 209 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC022709.1-201ENST00000615967 87 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC073349.3-201ENST00000617616 186 ntBASIC0.78□□□□□ -2.28
CD28P10747 AC090617.10-201ENST00000624308 134 ntBASIC0.78□□□□□ -2.28
CD28P10747 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.78□□□□□ -2.28
CD28P10747 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
CD28P10747 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CD28P10747 RNU6-727P-201ENST00000363592 107 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNU4-38P-201ENST00000364472 129 ntBASIC0.77□□□□□ -2.29
CD28P10747 SNORA22-201ENST00000383907 134 ntBASIC0.77□□□□□ -2.29
CD28P10747 Y_RNA.533-201ENST00000384596 114 ntBASIC0.77□□□□□ -2.29
CD28P10747 SNORA22C-201ENST00000384614 134 ntBASIC0.77□□□□□ -2.29
CD28P10747 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
CD28P10747 AL034345.1-201ENST00000407768 123 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNA5SP118-201ENST00000410385 109 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNU6-1148P-201ENST00000410992 104 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNU6-1054P-201ENST00000411293 104 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNU6-1114P-201ENST00000516022 107 ntBASIC0.77□□□□□ -2.29
CD28P10747 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
CD28P10747 AC091144.1-201ENST00000519573 138 ntBASIC0.77□□□□□ -2.29
CD28P10747 AL590705.4-201ENST00000532209 134 ntBASIC0.77□□□□□ -2.29
CD28P10747 CBX3P8-201ENST00000532412 525 ntBASIC0.77□□□□□ -2.29
CD28P10747 APOOP3-201ENST00000536787 586 ntBASIC0.77□□□□□ -2.29
CD28P10747 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.77□□□□□ -2.29
CD28P10747 AL022345.2-201ENST00000606307 135 ntBASIC0.77□□□□□ -2.29
CD28P10747 AC010999.1-201ENST00000611856 324 ntBASIC0.77□□□□□ -2.29
CD28P10747 AC015540.1-201ENST00000615828 501 ntBASIC0.77□□□□□ -2.29
CD28P10747 MIR6515-201ENST00000619843 57 ntBASIC0.77□□□□□ -2.29
CD28P10747 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.77□□□□□ -2.29
CD28P10747 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CD28P10747 RNU4-75P-201ENST00000364621 146 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU6-281P-201ENST00000384212 103 ntBASIC0.76□□□□□ -2.29
CD28P10747 Y_RNA.517-201ENST00000384551 106 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU6-541P-201ENST00000384709 110 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU6-1186P-201ENST00000410429 97 ntBASIC0.76□□□□□ -2.29
CD28P10747 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
CD28P10747 RPL30P16-201ENST00000419341 429 ntBASIC0.76□□□□□ -2.29
CD28P10747 MTND3P23-201ENST00000431980 347 ntBASIC0.76□□□□□ -2.29
CD28P10747 DYNLT3P2-201ENST00000442517 295 ntBASIC0.76□□□□□ -2.29
CD28P10747 RPS4XP11-201ENST00000446897 772 ntBASIC0.76□□□□□ -2.29
CD28P10747 SNORD5.1-201ENST00000458800 75 ntBASIC0.76□□□□□ -2.29
CD28P10747 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.76□□□□□ -2.29
CD28P10747 AC010598.1-201ENST00000510378 103 ntBASIC0.76□□□□□ -2.29
CD28P10747 AC097462.1-201ENST00000514125 324 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU7-175P-201ENST00000515915 61 ntBASIC0.76□□□□□ -2.29
CD28P10747 RNU6-1314P-201ENST00000517139 104 ntBASIC0.76□□□□□ -2.29
CD28P10747 EIF1P4-201ENST00000572664 335 ntBASIC0.76□□□□□ -2.29
CD28P10747 MIR5701-3-201ENST00000578890 82 ntBASIC0.76□□□□□ -2.29
CD28P10747 MIR5701-1-201ENST00000585138 82 ntBASIC0.76□□□□□ -2.29
CD28P10747 MIR4438-201ENST00000585271 93 ntBASIC0.76□□□□□ -2.29
CD28P10747 MIR5701-2-201ENST00000615634 82 ntBASIC0.76□□□□□ -2.29
CD28P10747 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.76□□□□□ -2.29
CD28P10747 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.9-201ENST00000362354 101 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.157-201ENST00000363638 102 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.184-201ENST00000363884 108 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.405-201ENST00000383979 100 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.451-201ENST00000384200 100 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.524-201ENST00000384564 100 ntBASIC0.75□□□□□ -2.29
CD28P10747 RNU6-306P-201ENST00000384617 107 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.561-201ENST00000384694 100 ntBASIC0.75□□□□□ -2.29
CD28P10747 MTCO3P19-201ENST00000415864 321 ntBASIC0.75□□□□□ -2.29
CD28P10747 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.75□□□□□ -2.29
CD28P10747 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.75□□□□□ -2.29
CD28P10747 AL445305.1-201ENST00000432577 575 ntBASIC0.75□□□□□ -2.29
CD28P10747 RNU7-40P-201ENST00000516397 64 ntBASIC0.75□□□□□ -2.29
CD28P10747 Y_RNA.683-201ENST00000516508 93 ntBASIC0.75□□□□□ -2.29
CD28P10747 RNU6-314P-201ENST00000516574 104 ntBASIC0.75□□□□□ -2.29
CD28P10747 RNU6-1088P-201ENST00000516850 104 ntBASIC0.75□□□□□ -2.29
CD28P10747 AC245505.1-201ENST00000556398 224 ntBASIC0.75□□□□□ -2.29
CD28P10747 MIR3684-201ENST00000579779 74 ntBASIC0.75□□□□□ -2.29
CD28P10747 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms