Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC105313.1-201ENST00000509121 353 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AL121579.1-201ENST00000555129 305 ntBASIC1.16□□□□□ -2.22
TGFAP01135 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AL078603.1-201ENST00000603824 313 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AL021879.1-201ENST00000611756 288 ntBASIC1.16□□□□□ -2.22
TGFAP01135 MIR3662-201ENST00000637030 95 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TGFAP01135 RNU1-22P-201ENST00000363334 158 ntBASIC1.15□□□□□ -2.23
TGFAP01135 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.15□□□□□ -2.23
TGFAP01135 SNORD5.1-201ENST00000458800 75 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AC046134.1-201ENST00000514454 666 ntBASIC1.15□□□□□ -2.23
TGFAP01135 RNU6-566P-201ENST00000516790 107 ntBASIC1.15□□□□□ -2.23
TGFAP01135 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AC091144.1-201ENST00000519573 138 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
TGFAP01135 AC090617.3-201ENST00000573670 475 ntBASIC1.15□□□□□ -2.23
TGFAP01135 AC012557.2-201ENST00000605919 418 ntBASIC1.15□□□□□ -2.23
TGFAP01135 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.15□□□□□ -2.23
TGFAP01135 RNU4-76P-201ENST00000364509 141 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNU6-281P-201ENST00000384212 103 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNU6-505P-201ENST00000384427 107 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNU6-831P-201ENST00000384548 107 ntBASIC1.14□□□□□ -2.23
TGFAP01135 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TGFAP01135 AC092991.1-201ENST00000477176 376 ntBASIC1.14□□□□□ -2.23
TGFAP01135 AC010469.2-201ENST00000496412 480 ntBASIC1.14□□□□□ -2.23
TGFAP01135 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNU6-107P-201ENST00000516643 102 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNU6-273P-201ENST00000516937 96 ntBASIC1.14□□□□□ -2.23
TGFAP01135 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
TGFAP01135 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
TGFAP01135 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
TGFAP01135 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
TGFAP01135 AC100810.6-201ENST00000638068 285 ntBASIC1.14□□□□□ -2.23
TGFAP01135 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TGFAP01135 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
TGFAP01135 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
TGFAP01135 RNU6-1264P-201ENST00000383891 107 ntBASIC1.13□□□□□ -2.23
TGFAP01135 Y_RNA.436-201ENST00000384097 102 ntBASIC1.13□□□□□ -2.23
TGFAP01135 SNORA12.1-201ENST00000390873 148 ntBASIC1.13□□□□□ -2.23
TGFAP01135 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TGFAP01135 RAB28P5-201ENST00000427490 651 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
TGFAP01135 AC097462.1-201ENST00000514125 324 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RNU6-720P-201ENST00000516363 108 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RNU7-28P-201ENST00000516759 62 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RNU6-1088P-201ENST00000516850 104 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
TGFAP01135 AC093023.1-201ENST00000547375 507 ntBASIC1.13□□□□□ -2.23
TGFAP01135 RPL21P9-201ENST00000556149 474 ntBASIC1.13□□□□□ -2.23
TGFAP01135 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
TGFAP01135 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
TGFAP01135 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
TGFAP01135 BX284668.6-201ENST00000606899 438 ntBASIC1.13□□□□□ -2.23
TGFAP01135 AC093913.1-201ENST00000614178 329 ntBASIC1.13□□□□□ -2.23
TGFAP01135 MIR6079-201ENST00000635807 62 ntBASIC1.13□□□□□ -2.23
TGFAP01135 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.13□□□□□ -2.23
TGFAP01135 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TGFAP01135 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
TGFAP01135 Y_RNA.295-201ENST00000364918 102 ntBASIC1.12□□□□□ -2.23
TGFAP01135 RNU4-12P-201ENST00000365233 139 ntBASIC1.12□□□□□ -2.23
TGFAP01135 RNU6-42P-201ENST00000384165 107 ntBASIC1.12□□□□□ -2.23
TGFAP01135 MIR489-201ENST00000384923 84 ntBASIC1.12□□□□□ -2.23
TGFAP01135 MTCYBP4-201ENST00000401524 249 ntBASIC1.12□□□□□ -2.23
TGFAP01135 USP9YP30-201ENST00000430729 455 ntBASIC1.12□□□□□ -2.23
TGFAP01135 RNA5SP220-201ENST00000516298 104 ntBASIC1.12□□□□□ -2.23
TGFAP01135 AC023157.2-201ENST00000540596 141 ntBASIC1.12□□□□□ -2.23
TGFAP01135 MIR6128-201ENST00000615528 109 ntBASIC1.12□□□□□ -2.23
TGFAP01135 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
TGFAP01135 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.12□□□□□ -2.23
TGFAP01135 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
TGFAP01135 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TGFAP01135 RNU6-199P-201ENST00000362954 107 ntBASIC1.11□□□□□ -2.23
TGFAP01135 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
TGFAP01135 Y_RNA.554-201ENST00000384672 102 ntBASIC1.11□□□□□ -2.23
TGFAP01135 STAG3L5P-204ENST00000443759 179 ntBASIC1.11□□□□□ -2.23
TGFAP01135 SNORA31.4-201ENST00000516049 129 ntBASIC1.11□□□□□ -2.23
TGFAP01135 RNU7-172P-201ENST00000517125 64 ntBASIC1.11□□□□□ -2.23
TGFAP01135 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.11□□□□□ -2.23
TGFAP01135 GHRLOS.1-201ENST00000610995 70 ntBASIC1.11□□□□□ -2.23
TGFAP01135 Y_RNA.106-201ENST00000363189 100 ntBASIC1.1□□□□□ -2.23
TGFAP01135 RNU6-593P-201ENST00000364716 112 ntBASIC1.1□□□□□ -2.23
TGFAP01135 RNU6-842P-201ENST00000384269 107 ntBASIC1.1□□□□□ -2.23
TGFAP01135 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.1□□□□□ -2.23
TGFAP01135 UBE2V1P7-201ENST00000446395 340 ntBASIC1.1□□□□□ -2.23
TGFAP01135 UQCRBP2-201ENST00000447827 297 ntBASIC1.1□□□□□ -2.23
TGFAP01135 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.1□□□□□ -2.23
TGFAP01135 RPS29P25-201ENST00000481709 171 ntBASIC1.1□□□□□ -2.23
TGFAP01135 AC074133.1-201ENST00000515696 183 ntBASIC1.1□□□□□ -2.23
TGFAP01135 RNU6-322P-201ENST00000516010 103 ntBASIC1.1□□□□□ -2.23
TGFAP01135 MIR4790-201ENST00000577799 79 ntBASIC1.1□□□□□ -2.23
TGFAP01135 MIR5701-3-201ENST00000578890 82 ntBASIC1.1□□□□□ -2.23
TGFAP01135 MIR5701-1-201ENST00000585138 82 ntBASIC1.1□□□□□ -2.23
TGFAP01135 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
TGFAP01135 AC136443.5-201ENST00000603741 370 ntBASIC1.1□□□□□ -2.23
TGFAP01135 MIR5701-2-201ENST00000615634 82 ntBASIC1.1□□□□□ -2.23
TGFAP01135 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
TGFAP01135 RNU6-1059P-201ENST00000363752 98 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms