| HPRT1 | P00492 | MIR6857-201 | ENST00000613267 | 93 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC005592.1-201 | ENST00000566527 | 1640 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC008163.1-202 | ENST00000636004 | 2889 nt | BASIC | 0.71 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | ZNF415-224 | ENST00000601493 | 2132 nt | TSL 1 (best) BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | TEX15-201 | ENST00000256246 | 10110 nt | TSL 1 (best) BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-451P-201 | ENST00000362921 | 107 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.405-201 | ENST00000383979 | 100 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.451-201 | ENST00000384200 | 100 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORA80D-201 | ENST00000384488 | 135 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.524-201 | ENST00000384564 | 100 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.561-201 | ENST00000384694 | 100 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-332P-201 | ENST00000391193 | 108 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MTCO3P19-201 | ENST00000415864 | 321 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL353614.1-201 | ENST00000445631 | 206 nt | TSL 5 BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC004930.1-201 | ENST00000470677 | 254 nt | TSL 2 BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC022493.2-201 | ENST00000506122 | 481 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.683-201 | ENST00000516508 | 93 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC026407.1-201 | ENST00000518369 | 204 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RPL21P9-201 | ENST00000556149 | 474 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR4273-201 | ENST00000582824 | 84 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC068790.6-201 | ENST00000602558 | 258 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC013244.2-201 | ENST00000603396 | 103 nt | BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | DEUP1-202 | ENST00000525646 | 1920 nt | TSL 1 (best) BASIC | 0.7 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.38-201 | ENST00000362617 | 102 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-969P-201 | ENST00000383900 | 105 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.414-201 | ENST00000384011 | 101 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORA20B-201 | ENST00000384220 | 132 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR200A-201 | ENST00000384875 | 90 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MTND3P23-201 | ENST00000431980 | 347 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL359636.3-201 | ENST00000439471 | 301 nt | TSL 2 BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC104332.1-201 | ENST00000440471 | 797 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RPS26P48-201 | ENST00000491713 | 339 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC018710.1-201 | ENST00000506509 | 158 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | PSMC1P5-201 | ENST00000512850 | 177 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AP002001.1-203 | ENST00000534002 | 267 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | NBR2-204 | ENST00000587322 | 63 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC080078.3-201 | ENST00000605407 | 463 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC022079.1-201 | ENST00000621546 | 602 nt | BASIC | 0.69 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-222P-201 | ENST00000362438 | 107 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORA1B-201 | ENST00000362535 | 133 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.51-201 | ENST00000362725 | 102 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNY3P3-201 | ENST00000363816 | 102 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-407P-201 | ENST00000365280 | 104 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-53P-201 | ENST00000365367 | 106 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORD116-11-201 | ENST00000383882 | 92 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR942-201 | ENST00000401111 | 86 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC005482.1-201 | ENST00000420758 | 575 nt | TSL 4 BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL138921.2-201 | ENST00000443919 | 578 nt | TSL 5 BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC096733.1-201 | ENST00000503844 | 402 nt | TSL 3 BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-351P-201 | ENST00000516097 | 100 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | ZNF436-AS1-205 | ENST00000518600 | 376 nt | TSL 5 BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL117336.2-201 | ENST00000602435 | 335 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC245008.1-201 | ENST00000608123 | 476 nt | BASIC | 0.68 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | DEFB134-201 | ENST00000382205 | 314 nt | APPRIS P1 TSL 1 (best) BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-376P-201 | ENST00000384731 | 106 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU2-64P-201 | ENST00000411315 | 191 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC018865.2-201 | ENST00000423631 | 129 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | USP9YP23-201 | ENST00000455085 | 407 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC046134.1-201 | ENST00000514454 | 666 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-1114P-201 | ENST00000516022 | 107 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-1291P-201 | ENST00000516591 | 104 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-273P-201 | ENST00000516937 | 96 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-341P-201 | ENST00000516973 | 96 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR3942-201 | ENST00000585264 | 109 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL359821.1-201 | ENST00000605519 | 182 nt | BASIC | 0.67 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | ZNF299P-201 | ENST00000406845 | 1804 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | SNORD116-1-201 | ENST00000384335 | 95 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR608-201 | ENST00000384820 | 100 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC006461.1-201 | ENST00000412637 | 326 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNA5SP20-201 | ENST00000515976 | 84 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-237P-201 | ENST00000515985 | 71 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | Y_RNA.706-201 | ENST00000516933 | 99 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AP000755.2-201 | ENST00000526777 | 571 nt | TSL 5 BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AP002004.2-201 | ENST00000531656 | 154 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | MIR4653-201 | ENST00000585107 | 83 nt | BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | AC092071.1-201 | ENST00000597260 | 549 nt | TSL 5 BASIC | 0.66 | □□□□□ -2.3 | | |
| HPRT1 | P00492 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HPRT1 | P00492 | RNU6-595P-201 | ENST00000363944 | 107 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HPRT1 | P00492 | Y_RNA.338-201 | ENST00000365320 | 114 nt | BASIC | 0.65 | □□□□□ -2.31 | | |
| HPRT1 | P00492 | LINC00583-201 | ENST00000381010 | 387 nt | TSL 2 BASIC | 0.65 | □□□□□ -2.31 | | |