Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
GPC4O75487 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AC027419.1-201ENST00000522976 328 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
GPC4O75487 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
GPC4O75487 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.86□□□□□ -2.11
GPC4O75487 AC090971.5-201ENST00000621102 293 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AC022140.2-201ENST00000623500 188 ntBASIC1.86□□□□□ -2.11
GPC4O75487 AL606534.2-204ENST00000635008 178 ntBASIC1.86□□□□□ -2.11
GPC4O75487 U6.92-201ENST00000636464 89 ntBASIC1.86□□□□□ -2.11
GPC4O75487 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
GPC4O75487 RNU1-115P-201ENST00000365329 160 ntBASIC1.85□□□□□ -2.11
GPC4O75487 Y_RNA.460-201ENST00000384255 102 ntBASIC1.85□□□□□ -2.11
GPC4O75487 MIR628-201ENST00000385229 95 ntBASIC1.85□□□□□ -2.11
GPC4O75487 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
GPC4O75487 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
GPC4O75487 PMCHL1-202ENST00000423102 261 ntBASIC1.85□□□□□ -2.11
GPC4O75487 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.85□□□□□ -2.11
GPC4O75487 CST2P1-201ENST00000425770 87 ntBASIC1.85□□□□□ -2.11
GPC4O75487 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
GPC4O75487 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
GPC4O75487 AC005034.5-201ENST00000604219 466 ntBASIC1.85□□□□□ -2.11
GPC4O75487 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
GPC4O75487 U6.108-201ENST00000637764 58 ntBASIC1.85□□□□□ -2.11
GPC4O75487 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
GPC4O75487 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
GPC4O75487 AC091812.1-201ENST00000432235 1948 ntBASIC1.84□□□□□ -2.11
GPC4O75487 MIR410-201ENST00000362222 80 ntBASIC1.84□□□□□ -2.11
GPC4O75487 Y_RNA.27-201ENST00000362540 103 ntBASIC1.84□□□□□ -2.11
GPC4O75487 Y_RNA.39-201ENST00000362620 98 ntBASIC1.84□□□□□ -2.11
GPC4O75487 Y_RNA.216-201ENST00000364205 93 ntBASIC1.84□□□□□ -2.11
GPC4O75487 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
GPC4O75487 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.84□□□□□ -2.11
GPC4O75487 MTND4P19-201ENST00000446659 478 ntBASIC1.84□□□□□ -2.11
GPC4O75487 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
GPC4O75487 RNU6-1146P-201ENST00000516282 102 ntBASIC1.84□□□□□ -2.11
GPC4O75487 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.84□□□□□ -2.11
GPC4O75487 MIR4659A-201ENST00000580269 81 ntBASIC1.84□□□□□ -2.11
GPC4O75487 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
GPC4O75487 AC069114.2-201ENST00000604699 304 ntBASIC1.84□□□□□ -2.11
GPC4O75487 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.84□□□□□ -2.11
GPC4O75487 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
GPC4O75487 RNU6-1019P-201ENST00000364424 107 ntBASIC1.83□□□□□ -2.12
GPC4O75487 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
GPC4O75487 Y_RNA.445-201ENST00000384168 102 ntBASIC1.83□□□□□ -2.12
GPC4O75487 SNORD78.2-201ENST00000391076 69 ntBASIC1.83□□□□□ -2.12
GPC4O75487 RNA5SP475-201ENST00000410568 110 ntBASIC1.83□□□□□ -2.12
GPC4O75487 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.83□□□□□ -2.12
GPC4O75487 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
GPC4O75487 FCF1P4-201ENST00000448326 183 ntBASIC1.83□□□□□ -2.12
GPC4O75487 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
GPC4O75487 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.83□□□□□ -2.12
GPC4O75487 AC104984.5-201ENST00000586878 94 ntBASIC1.83□□□□□ -2.12
GPC4O75487 AC004467.1-201ENST00000615678 330 ntBASIC1.83□□□□□ -2.12
GPC4O75487 AC240442.1-201ENST00000616055 283 ntBASIC1.83□□□□□ -2.12
GPC4O75487 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.83□□□□□ -2.12
GPC4O75487 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
GPC4O75487 AC010615.1-201ENST00000594254 1764 ntBASIC1.82□□□□□ -2.12
GPC4O75487 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GPC4O75487 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
GPC4O75487 MCFD2P1-201ENST00000417812 300 ntBASIC1.82□□□□□ -2.12
GPC4O75487 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.82□□□□□ -2.12
GPC4O75487 MTND1P14-201ENST00000427400 950 ntBASIC1.82□□□□□ -2.12
GPC4O75487 MTCO2P12-201ENST00000427426 682 ntBASIC1.82□□□□□ -2.12
GPC4O75487 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
GPC4O75487 RNU6-966P-201ENST00000516479 104 ntBASIC1.82□□□□□ -2.12
GPC4O75487 RNU7-128P-201ENST00000517247 62 ntBASIC1.82□□□□□ -2.12
GPC4O75487 RN7SKP295-201ENST00000517264 153 ntBASIC1.82□□□□□ -2.12
GPC4O75487 AC023442.1-201ENST00000531247 422 ntBASIC1.82□□□□□ -2.12
GPC4O75487 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.82□□□□□ -2.12
GPC4O75487 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
GPC4O75487 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.82□□□□□ -2.12
GPC4O75487 U6.115-201ENST00000636045 103 ntBASIC1.82□□□□□ -2.12
GPC4O75487 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
GPC4O75487 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
GPC4O75487 Y_RNA.101-201ENST00000363154 102 ntBASIC1.81□□□□□ -2.12
GPC4O75487 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
GPC4O75487 MIR504-201ENST00000385065 83 ntBASIC1.81□□□□□ -2.12
GPC4O75487 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
GPC4O75487 AL606517.2-201ENST00000442855 241 ntBASIC1.81□□□□□ -2.12
GPC4O75487 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.81□□□□□ -2.12
GPC4O75487 AL163195.1-201ENST00000496941 348 ntBASIC1.81□□□□□ -2.12
GPC4O75487 AC010598.1-201ENST00000510378 103 ntBASIC1.81□□□□□ -2.12
GPC4O75487 AC023157.2-201ENST00000540596 141 ntBASIC1.81□□□□□ -2.12
GPC4O75487 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
GPC4O75487 HSBP1P1-201ENST00000555205 166 ntBASIC1.81□□□□□ -2.12
GPC4O75487 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
GPC4O75487 AC022432.1-201ENST00000595739 310 ntBASIC1.81□□□□□ -2.12
GPC4O75487 AC103810.8-201ENST00000607347 118 ntBASIC1.81□□□□□ -2.12
GPC4O75487 MIR6715A-201ENST00000615929 79 ntBASIC1.81□□□□□ -2.12
GPC4O75487 U6.73-201ENST00000619194 103 ntBASIC1.81□□□□□ -2.12
GPC4O75487 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.81□□□□□ -2.12
GPC4O75487 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
GPC4O75487 RNU6-1266P-201ENST00000362794 105 ntBASIC1.8□□□□□ -2.12
GPC4O75487 RNU6-626P-201ENST00000363354 107 ntBASIC1.8□□□□□ -2.12
GPC4O75487 Y_RNA.148-201ENST00000363557 117 ntBASIC1.8□□□□□ -2.12
GPC4O75487 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
GPC4O75487 RNU6-20P-201ENST00000384106 107 ntBASIC1.8□□□□□ -2.12
GPC4O75487 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
GPC4O75487 MRPL35P1-201ENST00000404272 572 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms