Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 U2.16-201ENST00000613119 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.12-201ENST00000613778 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.9-201ENST00000615427 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.11-201ENST00000616345 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.2-201ENST00000616535 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.3-201ENST00000617785 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.19-201ENST00000618602 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 RNU2-1-201ENST00000618664 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.6-201ENST00000619225 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.5-201ENST00000619465 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 U2.10-201ENST00000620268 191 ntBASIC2.51□□□□□ -2.01
PRPF3O43395 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRPF3O43395 SNORA48.1-201ENST00000390879 135 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 RNA5SP450-201ENST00000411206 102 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 AC005002.2-201ENST00000438228 269 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.5□□□□□ -2.01
PRPF3O43395 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.5□□□□□ -2.01
PRPF3O43395 SNORA70.12-201ENST00000516084 153 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 RNU6-1046P-201ENST00000516538 107 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 IGLV3-17-201ENST00000519099 244 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 AP002001.1-203ENST00000534002 267 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 MIR5694-201ENST00000581190 76 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 MIR4524B-201ENST00000581569 115 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 MIR5002-201ENST00000584713 97 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 ZNF720P1-201ENST00000562403 1939 ntBASIC2.5□□□□□ -2.01
PRPF3O43395 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF3O43395 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 AC060773.1-201ENST00000421698 310 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF3O43395 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF3O43395 AC079804.2-201ENST00000490376 200 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 RNU1-41P-201ENST00000516161 162 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 RNU1-48P-201ENST00000516400 162 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF3O43395 AC055872.1-201ENST00000570978 278 ntBASIC2.49□□□□□ -2.01
PRPF3O43395 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF3O43395 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRPF3O43395 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
PRPF3O43395 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF3O43395 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.48□□□□□ -2.01
PRPF3O43395 CENPCP1-201ENST00000533085 2578 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 Y_RNA.214-201ENST00000364201 112 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 RNU6-937P-201ENST00000384325 106 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AL512604.1-201ENST00000404812 257 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 RNU2-20P-201ENST00000410425 191 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AL158823.1-201ENST00000418441 478 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 ELOCP20-201ENST00000422460 345 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.48□□□□□ -2.01
PRPF3O43395 RNY3P15-201ENST00000516297 97 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.48□□□□□ -2.01
PRPF3O43395 MIR1273D-201ENST00000577266 86 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 MIR4423-201ENST00000580922 80 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC069114.2-201ENST00000604699 304 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC004467.1-201ENST00000615678 330 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC006001.4-201ENST00000622243 395 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 AC091932.3-201ENST00000624223 323 ntBASIC2.48□□□□□ -2.01
PRPF3O43395 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
PRPF3O43395 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF3O43395 RNU6-770P-201ENST00000363929 105 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 Y_RNA.243-201ENST00000364481 109 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 RNA5SP212-201ENST00000391223 107 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 RPL21P1-201ENST00000399532 476 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AL355497.1-201ENST00000406262 551 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 RNU2-54P-201ENST00000410299 190 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.47□□□□□ -2.01
PRPF3O43395 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.47□□□□□ -2.01
PRPF3O43395 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF3O43395 RNU6-635P-201ENST00000516651 102 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AL117187.1-201ENST00000555482 181 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.47□□□□□ -2.01
PRPF3O43395 AC136932.1-201ENST00000574771 208 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AC005034.5-201ENST00000604219 466 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 AC005828.6-201ENST00000606610 232 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 MIR376A1-201ENST00000616574 68 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 MIR338-201ENST00000636369 67 ntBASIC2.47□□□□□ -2.01
PRPF3O43395 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PRPF3O43395 Y_RNA.19-201ENST00000362462 99 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 Y_RNA.570-201ENST00000384750 101 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 MIR548F4-201ENST00000408515 105 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.46□□□□□ -2.02
PRPF3O43395 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.46□□□□□ -2.02
PRPF3O43395 RNU2-12P-201ENST00000517216 168 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 AP005660.1-201ENST00000522972 293 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PRPF3O43395 MIR4300-201ENST00000581016 96 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 MIR4769-201ENST00000584126 77 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 AC022441.3-201ENST00000605737 136 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms