Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SNORA72.2-201ENST00000365028 127 ntBASIC1.38□□□□□ -2.19
CUX2O14529 Y_RNA.414-201ENST00000384011 101 ntBASIC1.38□□□□□ -2.19
CUX2O14529 MIR487A-201ENST00000385009 80 ntBASIC1.38□□□□□ -2.19
CUX2O14529 MIR153-2-201ENST00000385225 87 ntBASIC1.38□□□□□ -2.19
CUX2O14529 RNA5SP467-201ENST00000391274 118 ntBASIC1.38□□□□□ -2.19
CUX2O14529 RNU7-175P-201ENST00000515915 61 ntBASIC1.38□□□□□ -2.19
CUX2O14529 RNA5SP437-201ENST00000517249 129 ntBASIC1.38□□□□□ -2.19
CUX2O14529 AC109635.3-201ENST00000529536 185 ntBASIC1.38□□□□□ -2.19
CUX2O14529 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.38□□□□□ -2.19
CUX2O14529 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.38□□□□□ -2.19
CUX2O14529 MIR4636-201ENST00000582271 80 ntBASIC1.38□□□□□ -2.19
CUX2O14529 snoZ196.1-201ENST00000625269 89 ntBASIC1.38□□□□□ -2.19
CUX2O14529 snoU2-30.2-201ENST00000362805 70 ntBASIC1.37□□□□□ -2.19
CUX2O14529 Y_RNA.136-201ENST00000363444 102 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNU6-137P-201ENST00000363680 108 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNU6-280P-201ENST00000364145 104 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNU6-1013P-201ENST00000384180 107 ntBASIC1.37□□□□□ -2.19
CUX2O14529 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AL161935.2-201ENST00000414627 60 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.37□□□□□ -2.19
CUX2O14529 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
CUX2O14529 snoU13.27-201ENST00000459278 104 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RPS26P45-201ENST00000471748 340 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AL163195.1-201ENST00000496941 348 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.37□□□□□ -2.19
CUX2O14529 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.37□□□□□ -2.19
CUX2O14529 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.37□□□□□ -2.19
CUX2O14529 AL121890.5-201ENST00000620848 304 ntBASIC1.37□□□□□ -2.19
CUX2O14529 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CUX2O14529 RNU6-451P-201ENST00000362921 107 ntBASIC1.37□□□□□ -2.19
CUX2O14529 MIR515-2-201ENST00000384883 83 ntBASIC1.37□□□□□ -2.19
CUX2O14529 MIR515-1-201ENST00000384884 83 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNA5SP511-201ENST00000410487 115 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AC009161.1-201ENST00000417306 376 ntBASIC1.37□□□□□ -2.19
CUX2O14529 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.37□□□□□ -2.19
CUX2O14529 HMGN1P12-201ENST00000499125 195 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
CUX2O14529 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.37□□□□□ -2.19
CUX2O14529 SNORD11B-201ENST00000607707 90 ntBASIC1.37□□□□□ -2.19
CUX2O14529 RNU5F-3P-201ENST00000363767 117 ntBASIC1.36□□□□□ -2.19
CUX2O14529 SNORD115-8-201ENST00000363856 82 ntBASIC1.36□□□□□ -2.19
CUX2O14529 Y_RNA.212-201ENST00000364177 102 ntBASIC1.36□□□□□ -2.19
CUX2O14529 SNORD115-38-201ENST00000365037 82 ntBASIC1.36□□□□□ -2.19
CUX2O14529 Y_RNA.554-201ENST00000384672 102 ntBASIC1.36□□□□□ -2.19
CUX2O14529 RNU6-331P-201ENST00000384724 107 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.36□□□□□ -2.19
CUX2O14529 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.36□□□□□ -2.19
CUX2O14529 AC008134.1-201ENST00000420943 193 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
CUX2O14529 DAP3P1-201ENST00000441522 278 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AC079354.2-201ENST00000453523 154 ntBASIC1.36□□□□□ -2.19
CUX2O14529 RPS26P55-201ENST00000471178 356 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AC025647.1-201ENST00000517879 253 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.36□□□□□ -2.19
CUX2O14529 MIR5696-201ENST00000578474 85 ntBASIC1.36□□□□□ -2.19
CUX2O14529 MIR4653-201ENST00000585107 83 ntBASIC1.36□□□□□ -2.19
CUX2O14529 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AC097065.2-201ENST00000608159 533 ntBASIC1.36□□□□□ -2.19
CUX2O14529 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
CUX2O14529 AC093913.1-201ENST00000614178 329 ntBASIC1.36□□□□□ -2.19
CUX2O14529 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CUX2O14529 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CUX2O14529 SNORD115-32-201ENST00000364079 82 ntBASIC1.35□□□□□ -2.19
CUX2O14529 Y_RNA.453-201ENST00000384223 109 ntBASIC1.35□□□□□ -2.19
CUX2O14529 RNA5SP63-201ENST00000391225 112 ntBASIC1.35□□□□□ -2.19
CUX2O14529 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.35□□□□□ -2.19
CUX2O14529 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
CUX2O14529 RPL30P16-201ENST00000419341 429 ntBASIC1.35□□□□□ -2.19
CUX2O14529 RNU6-221P-201ENST00000459541 99 ntBASIC1.35□□□□□ -2.19
CUX2O14529 HMGN2P26-201ENST00000463169 339 ntBASIC1.35□□□□□ -2.19
CUX2O14529 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.35□□□□□ -2.19
CUX2O14529 RNU6-273P-201ENST00000516937 96 ntBASIC1.35□□□□□ -2.19
CUX2O14529 AC024995.1-201ENST00000523014 93 ntBASIC1.35□□□□□ -2.19
CUX2O14529 MIR4709-201ENST00000577272 72 ntBASIC1.35□□□□□ -2.19
CUX2O14529 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
CUX2O14529 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.35□□□□□ -2.19
CUX2O14529 MIR6835-201ENST00000621552 64 ntBASIC1.35□□□□□ -2.19
CUX2O14529 Y_RNA.287-201ENST00000364853 94 ntBASIC1.34□□□□□ -2.19
CUX2O14529 Y_RNA.319-201ENST00000365138 92 ntBASIC1.34□□□□□ -2.19
CUX2O14529 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
CUX2O14529 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
CUX2O14529 MRPL35P3-201ENST00000421557 364 ntBASIC1.34□□□□□ -2.19
CUX2O14529 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.34□□□□□ -2.19
CUX2O14529 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.34□□□□□ -2.19
CUX2O14529 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
CUX2O14529 AC009248.2-201ENST00000619826 254 ntBASIC1.34□□□□□ -2.19
CUX2O14529 AC100810.6-201ENST00000638068 285 ntBASIC1.34□□□□□ -2.19
CUX2O14529 Y_RNA.179-201ENST00000363844 90 ntBASIC1.33□□□□□ -2.2
CUX2O14529 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.33□□□□□ -2.2
CUX2O14529 MIR1185-2-201ENST00000408687 86 ntBASIC1.33□□□□□ -2.2
CUX2O14529 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.33□□□□□ -2.2
CUX2O14529 MTND1P5-201ENST00000517906 940 ntBASIC1.33□□□□□ -2.2
CUX2O14529 RNU6-727P-201ENST00000363592 107 ntBASIC1.32□□□□□ -2.2
CUX2O14529 RNU4-12P-201ENST00000365233 139 ntBASIC1.32□□□□□ -2.2
CUX2O14529 RNU6-950P-201ENST00000384651 107 ntBASIC1.32□□□□□ -2.2
CUX2O14529 MTATP6P13-201ENST00000438531 667 ntBASIC1.32□□□□□ -2.2
CUX2O14529 RNU1-54P-201ENST00000517181 120 ntBASIC1.32□□□□□ -2.2
CUX2O14529 AL590705.4-201ENST00000532209 134 ntBASIC1.32□□□□□ -2.2
CUX2O14529 AC004812.1-201ENST00000540773 146 ntBASIC1.32□□□□□ -2.2
CUX2O14529 AL359075.3-201ENST00000613288 217 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms