Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-835P-201ENST00000516974 104 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU7-172P-201ENST00000517125 64 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC004812.1-201ENST00000540773 146 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 OSBPL9P5-201ENST00000542581 171 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 ZNF519P2-201ENST00000557032 169 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 UBL5P4-201ENST00000562584 236 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 PIGPP4-201ENST00000584447 307 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 AC090582.1-201ENST00000636321 199 ntBASIC0.59□□□□□ -2.31
UPK1AO00322 RNU6-1252P-201ENST00000363054 104 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 Y_RNA.191-201ENST00000363972 113 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 Y_RNA.267-201ENST00000364679 109 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 SNORA25.9-201ENST00000365087 128 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 Y_RNA.363-201ENST00000365529 113 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
UPK1AO00322 U8.16-201ENST00000391279 133 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.58□□□□□ -2.32
UPK1AO00322 AC093850.1-201ENST00000454121 251 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC097462.1-201ENST00000514125 324 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC093303.1-201ENST00000514549 295 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC134698.4-201ENST00000523451 826 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.58□□□□□ -2.32
UPK1AO00322 AP002001.1-203ENST00000534002 267 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 MIR4452-201ENST00000583004 71 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AC010999.1-201ENST00000611856 324 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 AP000770.2-201ENST00000623694 100 ntBASIC0.58□□□□□ -2.32
UPK1AO00322 Y_RNA.77-201ENST00000362962 107 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RNU6-17P-201ENST00000384245 107 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RNU6-18P-201ENST00000384527 107 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RNU6-95P-201ENST00000384697 107 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RNU6-1068P-201ENST00000410958 103 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.57□□□□□ -2.32
UPK1AO00322 MTCO3P19-201ENST00000415864 321 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 SEPT14P3-201ENST00000439401 183 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AC104332.1-201ENST00000440471 797 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AL732372.2-207ENST00000445840 183 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 MTCO2P7-201ENST00000446518 666 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.57□□□□□ -2.32
UPK1AO00322 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.57□□□□□ -2.32
UPK1AO00322 SEPT14P2-201ENST00000453405 183 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RNU7-90P-201ENST00000459216 62 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 RPL30P10-201ENST00000488148 337 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.57□□□□□ -2.32
UPK1AO00322 SEPT14P4-201ENST00000513445 186 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 FO082796.1-201ENST00000523795 183 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AC019193.3-201ENST00000609144 554 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 AC068137.3-201ENST00000639191 341 ntBASIC0.57□□□□□ -2.32
UPK1AO00322 Y_RNA.372-201ENST00000365599 102 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 RNU6-969P-201ENST00000383900 105 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 SNORD116-8-201ENST00000384365 95 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 RPEP5-201ENST00000441137 268 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.56□□□□□ -2.32
UPK1AO00322 AC091021.1-201ENST00000468051 388 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 RNU7-175P-201ENST00000515915 61 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 AC091144.1-201ENST00000519573 138 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
UPK1AO00322 AC124303.1-201ENST00000605703 360 ntBASIC0.56□□□□□ -2.32
UPK1AO00322 RNA5SP361-201ENST00000362686 118 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 SNORD116-13-201ENST00000384408 92 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 RNU6-376P-201ENST00000384731 106 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 RNA5SP482-201ENST00000391269 118 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 MTCO3P40-201ENST00000392516 676 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AL590632.1-201ENST00000424289 371 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.55□□□□□ -2.32
UPK1AO00322 MTND1P11-201ENST00000456661 876 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AP000870.1-201ENST00000472927 406 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 OR9P1P-201ENST00000496431 281 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 SNORD111.1-201ENST00000516421 86 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 Y_RNA.683-201ENST00000516508 93 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 Y_RNA.693-201ENST00000516641 110 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 RNU6-341P-201ENST00000516973 96 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AP002004.2-201ENST00000531656 154 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AL512360.1-201ENST00000555346 234 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 AC010525.2-201ENST00000590920 195 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.55□□□□□ -2.32
UPK1AO00322 MIR3974-201ENST00000637126 96 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 CASC19-280ENST00000642102 1351 ntBASIC0.55□□□□□ -2.32
UPK1AO00322 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
UPK1AO00322 AC005592.1-201ENST00000566527 1640 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 RNU6-407P-201ENST00000365280 104 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MIR10B-201ENST00000385011 110 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 DEFB108C-201ENST00000400154 252 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 USMG5P1-201ENST00000425964 177 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 FABP5P4-201ENST00000437203 171 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MTATP6P13-201ENST00000438531 667 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MTCO3P18-201ENST00000440206 761 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 RPS26P48-201ENST00000491713 339 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.54□□□□□ -2.32
UPK1AO00322 AC107401.1-201ENST00000503426 685 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MIR4273-201ENST00000582824 84 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MIR3611-201ENST00000584484 83 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms