Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AC023157.2-201ENST00000540596 141 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 MIR1273G-201ENST00000577677 100 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 MIR5583-1-201ENST00000580941 59 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 AC064836.2-201ENST00000609491 462 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 TUSC7.1-201ENST00000610969 165 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.06□□□□□ -2.4
ERGIC3Q9Y282 SNORA1B-201ENST00000362535 133 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-1317P-201ENST00000364582 104 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-1297P-201ENST00000384415 104 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-606P-201ENST00000384721 111 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 MIR489-201ENST00000384923 84 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-994P-201ENST00000410507 111 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 U8.21-201ENST00000459536 136 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RN7SKP164-201ENST00000516138 266 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNA5SP54-201ENST00000516951 92 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-341P-201ENST00000516973 96 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-1116P-201ENST00000517269 99 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 MTND1P35-201ENST00000526739 508 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC091178.2-201ENST00000584401 117 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 MIR548AB-201ENST00000584917 84 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC006435.5-201ENST00000624486 112 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AC008133.2-201ENST00000624540 351 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 AL008636.1-201ENST00000625038 1018 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.05□□□□□ -2.4
ERGIC3Q9Y282 RNU6-833P-201ENST00000363486 107 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 RNU6-903P-201ENST00000391270 109 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AC091021.1-201ENST00000468051 388 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 RPL23AP75-201ENST00000491601 451 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AC010469.2-201ENST00000496412 480 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AC005178.1-201ENST00000508392 440 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AC097462.1-201ENST00000514125 324 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AP003327.1-201ENST00000529684 127 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 SCOCP1-201ENST00000554676 349 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
ERGIC3Q9Y282 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 RNU4-67P-201ENST00000364569 141 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 Y_RNA.267-201ENST00000364679 109 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 MIR562-201ENST00000384894 95 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 MIR891A-201ENST00000401237 79 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 RNU7-41P-201ENST00000515917 61 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 AP003461.1-201ENST00000528866 78 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 AC104383.1-201ENST00000530297 370 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 AP002004.2-201ENST00000531656 154 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 AC007684.1-201ENST00000609671 477 ntBASIC0.03□□□□□ -2.4
ERGIC3Q9Y282 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 SNORD115-8-201ENST00000363856 82 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 SNORD113.3-201ENST00000364630 78 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 SNORD115-38-201ENST00000365037 82 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 RNU6-282P-201ENST00000365357 103 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 RNU6-784P-201ENST00000384330 106 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 AL049545.1-201ENST00000401856 572 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 MTCO3P19-201ENST00000415864 321 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 Z98949.2-201ENST00000440996 144 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 SNRPGP12-201ENST00000449481 213 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 MTCO3P10-201ENST00000455912 772 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 RNU7-172P-201ENST00000517125 64 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 MIR4300-201ENST00000581016 96 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 AL391834.2-201ENST00000609982 546 ntBASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 FER-210ENST00000628534 558 ntTSL 5 BASIC0.02□□□□□ -2.41
ERGIC3Q9Y282 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 RNU4-45P-201ENST00000365469 141 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 Y_RNA.415-201ENST00000384012 112 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 RNU6-456P-201ENST00000384493 107 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 MIR573-201ENST00000384964 99 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 ZNF885P-201ENST00000420174 1098 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 CYCTP-201ENST00000504253 315 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 SNORA14.1-201ENST00000516113 141 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 SNORA25.14-201ENST00000516481 132 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 RNU11-2P-201ENST00000516898 142 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 RPL21P9-201ENST00000556149 474 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 uc_338.34-201ENST00000617467 174 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 AC009161.2-201ENST00000624626 138 ntBASIC0.01□□□□□ -2.41
ERGIC3Q9Y282 AC010608.3-201ENST00000625048 527 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms