| MALT1 | Q9UDY8 | MIR5006-201 | ENST00000583027 | 110 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | RPL17P51-201 | ENST00000605218 | 238 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | AC068205.3-201 | ENST00000636385 | 468 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | AL807742.1-203 | ENST00000637444 | 759 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | MCMDC2-207 | ENST00000492775 | 1831 nt | TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | AC016717.2-201 | ENST00000609089 | 5141 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.15 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.15 | □□□□□ -2.06 | | |
| MALT1 | Q9UDY8 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.188-201 | ENST00000363952 | 111 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | SNORD58.1-201 | ENST00000391313 | 66 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-625P-201 | ENST00000459412 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | HMGB3P17-201 | ENST00000504195 | 649 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC093893.1-201 | ENST00000505781 | 510 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-586P-201 | ENST00000517265 | 104 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | IGHVIII-5-1-201 | ENST00000523059 | 99 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL109918.3-201 | ENST00000603072 | 338 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | SNORD11B-201 | ENST00000607707 | 90 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | ZEB2_AS1_1.1-201 | ENST00000621504 | 128 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR1248-201 | ENST00000629190 | 106 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | KIF20B-202 | ENST00000371728 | 6419 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MARCH7-203 | ENST00000409591 | 2147 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-1175P-201 | ENST00000365200 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.350-201 | ENST00000365409 | 98 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-301P-201 | ENST00000384277 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL033519.2-201 | ENST00000403958 | 392 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.602-201 | ENST00000410535 | 92 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC009963.1-201 | ENST00000417265 | 157 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | TRBV25OR9-2-201 | ENST00000438417 | 374 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | NDUFB4P10-201 | ENST00000452541 | 359 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | HMGN2P9-201 | ENST00000476875 | 229 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | CFAP100-207 | ENST00000510833 | 481 nt | APPRIS ALT2 TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC008892.1-201 | ENST00000511861 | 384 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | SNORA48.11-201 | ENST00000517015 | 89 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-1271P-201 | ENST00000517049 | 105 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU2-12P-201 | ENST00000517216 | 168 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC069133.1-201 | ENST00000522857 | 566 nt | TSL 4 BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR3128-201 | ENST00000581957 | 66 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC008749.1-201 | ENST00000597650 | 306 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC010900.2-201 | ENST00000604508 | 210 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL670379.2-201 | ENST00000604983 | 252 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | ETDC-201 | ENST00000635820 | 180 nt | APPRIS P1 BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | IGHVIII-44-202 | ENST00000636235 | 289 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | ARHGAP15-202 | ENST00000409869 | 2968 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.60-201 | ENST00000362831 | 98 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-234P-201 | ENST00000365229 | 104 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.361-201 | ENST00000365515 | 120 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-1264P-201 | ENST00000383891 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.418-201 | ENST00000384029 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR548B-201 | ENST00000385247 | 97 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR320B2-201 | ENST00000408479 | 138 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | NCKAP5-IT1-201 | ENST00000416437 | 554 nt | TSL 4 BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC096920.1-201 | ENST00000423991 | 241 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC113383.1-204 | ENST00000507060 | 552 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | DEFB108E-201 | ENST00000524692 | 240 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC005176.2-201 | ENST00000596933 | 147 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | SNORD113-5-201 | ENST00000607261 | 78 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RMDN2-203 | ENST00000402091 | 1973 nt | TSL 2 BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | ZBTB6-201 | ENST00000373659 | 4106 nt | APPRIS P1 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIR340-201 | ENST00000362125 | 95 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-907P-201 | ENST00000390924 | 102 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC108059.2-201 | ENST00000434626 | 151 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | MTND4LP30-201 | ENST00000454092 | 297 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | SEPT14P8-201 | ENST00000508026 | 178 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC010457.1-201 | ENST00000510469 | 458 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | RNU6-794P-201 | ENST00000517261 | 64 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| MALT1 | Q9UDY8 | AC022469.2-201 | ENST00000554759 | 396 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |