Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 AL359880.1-201ENST00000621879 266 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.73□□□□□ -2.29
CLN6Q9NWW5 MIR6079-201ENST00000635807 62 ntBASIC0.73□□□□□ -2.29
CLN6Q9NWW5 RNU6-17P-201ENST00000384245 107 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNU6-18P-201ENST00000384527 107 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 MIR200A-201ENST00000384875 90 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNU6-482P-201ENST00000391068 107 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 MTND1P11-201ENST00000456661 876 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC010486.3-201ENST00000511602 785 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC093303.1-201ENST00000514549 295 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNU6-917P-201ENST00000516294 104 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNU2-56P-201ENST00000516826 190 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC090142.3-201ENST00000519012 385 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC134698.4-201ENST00000523451 826 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AL590705.4-201ENST00000532209 134 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AL121579.1-201ENST00000555129 305 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 MTND3P12-201ENST00000559068 328 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC010525.2-201ENST00000590920 195 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AP000942.3-201ENST00000603702 160 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 AC019193.3-201ENST00000609144 554 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.72□□□□□ -2.29
CLN6Q9NWW5 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CLN6Q9NWW5 RNA5SP99-201ENST00000364020 114 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 SNORA2.2-201ENST00000365473 135 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 RNU6-259P-201ENST00000383999 107 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 RNU6-424P-201ENST00000384367 105 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AF228730.1-201ENST00000397972 663 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC010598.1-201ENST00000510378 103 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 RNU7-172P-201ENST00000517125 64 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.71□□□□□ -2.3
CLN6Q9NWW5 RPL21P9-201ENST00000556149 474 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 DISC2.1-201ENST00000612827 205 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC005858.4-201ENST00000623191 700 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC091895.1-201ENST00000624494 256 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC124864.2-201ENST00000624736 186 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
CLN6Q9NWW5 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.327-201ENST00000365201 102 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 U8.16-201ENST00000391279 133 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.615-201ENST00000410769 117 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 MTCO3P18-201ENST00000440206 761 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AL163540.1-201ENST00000485382 386 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC097462.1-201ENST00000514125 324 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 RNU6-1281P-201ENST00000516223 105 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 RNU6-405P-201ENST00000516637 110 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 RNU6-197P-201ENST00000516680 100 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC091144.1-201ENST00000519573 138 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AL162413.1-201ENST00000603198 110 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC124303.1-201ENST00000605703 360 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AC010999.1-201ENST00000611856 324 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 AL138726.1-201ENST00000614873 333 ntBASIC0.7□□□□□ -2.3
CLN6Q9NWW5 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 MIR562-201ENST00000384894 95 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 MTCO3P19-201ENST00000415864 321 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 AC093850.1-201ENST00000454121 251 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 AP000870.1-201ENST00000472927 406 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 OR9P1P-201ENST00000496431 281 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RNU7-175P-201ENST00000515915 61 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RNU7-12P-201ENST00000516030 62 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 RNU7-28P-201ENST00000516759 62 ntBASIC0.69□□□□□ -2.3
CLN6Q9NWW5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
CLN6Q9NWW5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CLN6Q9NWW5 Y_RNA.530-201ENST00000384587 101 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 MIR10B-201ENST00000385011 110 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 MTATP6P13-201ENST00000438531 667 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 MTND1P26-201ENST00000440488 538 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 AC092473.1-201ENST00000441098 221 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 MTCO2P7-201ENST00000446518 666 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 RNU6-256P-201ENST00000516747 97 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.68□□□□□ -2.3
CLN6Q9NWW5 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
CLN6Q9NWW5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms